Bump to 0.13

.dev/Manifest.toml

@@ -1,6 +1,6 @@
 # This file is machine-generated - editing it directly is not advised
 
-julia_version = "1.9.3"
+julia_version = "1.10.0"
 manifest_format = "2.0"
 project_hash = "30b405be1c677184b7703a9bfb3d2100029ccad0"
 
@@ -16,9 +16,14 @@ uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f"
 
 [[deps.CSTParser]]
 deps = ["Tokenize"]
-git-tree-sha1 = "3ddd48d200eb8ddf9cb3e0189fc059fd49b97c1f"
+git-tree-sha1 = "b1d309487c04e92253b55c1f803b1d6f0e136920"
 uuid = "00ebfdb7-1f24-5e51-bd34-a7502290713f"
-version = "3.3.6"
+version = "3.4.1"
+
+[[deps.Combinatorics]]
+git-tree-sha1 = "08c8b6831dc00bfea825826be0bc8336fc369860"
+uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa"
+version = "1.0.2"
 
 [[deps.CommonMark]]
 deps = ["Crayons", "JSON", "PrecompileTools", "URIs"]
@@ -27,10 +32,10 @@ uuid = "a80b9123-70ca-4bc0-993e-6e3bcb318db6"
 version = "0.8.12"
 
 [[deps.Compat]]
-deps = ["UUIDs"]
-git-tree-sha1 = "8a62af3e248a8c4bad6b32cbbe663ae02275e32c"
+deps = ["TOML", "UUIDs"]
+git-tree-sha1 = "c955881e3c981181362ae4088b35995446298b80"
 uuid = "34da2185-b29b-5c13-b0c7-acf172513d20"
-version = "4.10.0"
+version = "4.14.0"
 
     [deps.Compat.extensions]
     CompatLinearAlgebraExt = "LinearAlgebra"
@@ -46,9 +51,9 @@ version = "4.1.1"
 
 [[deps.DataStructures]]
 deps = ["Compat", "InteractiveUtils", "OrderedCollections"]
-git-tree-sha1 = "3dbd312d370723b6bb43ba9d02fc36abade4518d"
+git-tree-sha1 = "1fb174f0d48fe7d142e1109a10636bc1d14f5ac2"
 uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8"
-version = "0.18.15"
+version = "0.18.17"
 
 [[deps.Dates]]
 deps = ["Printf"]
@@ -78,29 +83,34 @@ uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6"
 version = "0.21.4"
 
 [[deps.JuliaFormatter]]
-deps = ["CSTParser", "CommonMark", "DataStructures", "Glob", "Pkg", "PrecompileTools", "Tokenize"]
-git-tree-sha1 = "3d5b5b539e4606dcca0e6a467b98a64c8da4850b"
+deps = ["CSTParser", "Combinatorics", "CommonMark", "DataStructures", "Glob", "Pkg", "PrecompileTools", "Tokenize"]
+git-tree-sha1 = "fde717f9e3fe6ffb0336bcc2142cfa71dd9df1f5"
 uuid = "98e50ef6-434e-11e9-1051-2b60c6c9e899"
-version = "1.0.42"
+version = "1.0.50"
 
 [[deps.LibCURL]]
 deps = ["LibCURL_jll", "MozillaCACerts_jll"]
 uuid = "b27032c2-a3e7-50c8-80cd-2d36dbcbfd21"
-version = "0.6.3"
+version = "0.6.4"
 
 [[deps.LibCURL_jll]]
 deps = ["Artifacts", "LibSSH2_jll", "Libdl", "MbedTLS_jll", "Zlib_jll", "nghttp2_jll"]
 uuid = "deac9b47-8bc7-5906-a0fe-35ac56dc84c0"
-version = "7.84.0+0"
+version = "8.4.0+0"
 
 [[deps.LibGit2]]
-deps = ["Base64", "NetworkOptions", "Printf", "SHA"]
+deps = ["Base64", "LibGit2_jll", "NetworkOptions", "Printf", "SHA"]
 uuid = "76f85450-5226-5b5a-8eaa-529ad045b433"
 
+[[deps.LibGit2_jll]]
+deps = ["Artifacts", "LibSSH2_jll", "Libdl", "MbedTLS_jll"]
+uuid = "e37daf67-58a4-590a-8e99-b0245dd2ffc5"
+version = "1.6.4+0"
+
 [[deps.LibSSH2_jll]]
 deps = ["Artifacts", "Libdl", "MbedTLS_jll"]
 uuid = "29816b5a-b9ab-546f-933c-edad1886dfa8"
-version = "1.10.2+0"
+version = "1.11.0+1"
 
 [[deps.Libdl]]
 uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb"
@@ -115,34 +125,34 @@ uuid = "d6f4376e-aef5-505a-96c1-9c027394607a"
 [[deps.MbedTLS_jll]]
 deps = ["Artifacts", "Libdl"]
 uuid = "c8ffd9c3-330d-5841-b78e-0817d7145fa1"
-version = "2.28.2+0"
+version = "2.28.2+1"
 
 [[deps.Mmap]]
 uuid = "a63ad114-7e13-5084-954f-fe012c677804"
 
 [[deps.MozillaCACerts_jll]]
 uuid = "14a3606d-f60d-562e-9121-12d972cd8159"
-version = "2022.10.11"
+version = "2023.1.10"
 
 [[deps.NetworkOptions]]
 uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908"
 version = "1.2.0"
 
 [[deps.OrderedCollections]]
-git-tree-sha1 = "2e73fe17cac3c62ad1aebe70d44c963c3cfdc3e3"
+git-tree-sha1 = "dfdf5519f235516220579f949664f1bf44e741c5"
 uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d"
-version = "1.6.2"
+version = "1.6.3"
 
 [[deps.Parsers]]
 deps = ["Dates", "PrecompileTools", "UUIDs"]
-git-tree-sha1 = "a935806434c9d4c506ba941871b327b96d41f2bf"
+git-tree-sha1 = "8489905bcdbcfac64d1daa51ca07c0d8f0283821"
 uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0"
-version = "2.8.0"
+version = "2.8.1"
 
 [[deps.Pkg]]
 deps = ["Artifacts", "Dates", "Downloads", "FileWatching", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Serialization", "TOML", "Tar", "UUIDs", "p7zip_jll"]
 uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f"
-version = "1.9.2"
+version = "1.10.0"
 
 [[deps.PrecompileTools]]
 deps = ["Preferences"]
@@ -152,9 +162,9 @@ version = "1.2.0"
 
 [[deps.Preferences]]
 deps = ["TOML"]
-git-tree-sha1 = "00805cd429dcb4870060ff49ef443486c262e38e"
+git-tree-sha1 = "9e8fed0505b0c15b4c1295fd59ea47b411c019cf"
 uuid = "21216c6a-2e73-6563-6e65-726566657250"
-version = "1.4.1"
+version = "1.4.2"
 
 [[deps.Printf]]
 deps = ["Unicode"]
@@ -165,7 +175,7 @@ deps = ["InteractiveUtils", "Markdown", "Sockets", "Unicode"]
 uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb"
 
 [[deps.Random]]
-deps = ["SHA", "Serialization"]
+deps = ["SHA"]
 uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
 
 [[deps.SHA]]
@@ -189,9 +199,9 @@ uuid = "a4e569a6-e804-4fa4-b0f3-eef7a1d5b13e"
 version = "1.10.0"
 
 [[deps.Tokenize]]
-git-tree-sha1 = "0454d9a9bad2400c7ccad19ca832a2ef5a8bc3a1"
+git-tree-sha1 = "5b5a892ba7704c0977013bd0f9c30f5d962181e0"
 uuid = "0796e94c-ce3b-5d07-9a54-7f471281c624"
-version = "0.5.26"
+version = "0.5.28"
 
 [[deps.URIs]]
 git-tree-sha1 = "67db6cc7b3821e19ebe75791a9dd19c9b1188f2b"
@@ -208,14 +218,14 @@ uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5"
 [[deps.Zlib_jll]]
 deps = ["Libdl"]
 uuid = "83775a58-1f1d-513f-b197-d71354ab007a"
-version = "1.2.13+0"
+version = "1.2.13+1"
 
 [[deps.nghttp2_jll]]
 deps = ["Artifacts", "Libdl"]
 uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d"
-version = "1.48.0+0"
+version = "1.52.0+1"
 
 [[deps.p7zip_jll]]
 deps = ["Artifacts", "Libdl"]
 uuid = "3f19e933-33d8-53b3-aaab-bd5110c3b7a0"
-version = "17.4.0+0"
+version = "17.4.0+2"

NEWS.md

@@ -1,9 +1,11 @@
 ClimaCore.jl Release Notes
 ========================
 
-Main
+v0.13.0
 -------
 - ![][badge-🤖precisionΔ]![][badge-🚀performance] Slight performance improvement by replacing `rdiv` with `rmul`. PR ([#1496](https://github.com/CliMA/ClimaCore.jl/pull/1496)) Machine-precision differences are expected.
+- ![][badge-💥breaking]![][badge-🚀performance] Rewritten `distributed_remapping`. New `distributed_remapping` is non-allocating and up to 1000x faster (on GPUs). New `distributed_remapping` no longer supports the `physical_z` argument (this option is still available in `Remapping.interpolate_column`). New `interpolate!` function is available for remapping in-place. The new preferred way to define a `Rampper` is `Remapper(space, target_hcoords, target_zcoords)` (instead of `Remapper(target_hcoords, target_zcoords, space)`). 
+  PR ([#1630](https://github.com/CliMA/ClimaCore.jl/pull/1630))
 
 v0.12.1
 -------

Project.toml

@@ -1,7 +1,7 @@
 name = "ClimaCore"
 uuid = "d414da3d-4745-48bb-8d80-42e94e092884"
 authors = ["CliMA Contributors <[email protected]>"]
-version = "0.12.1"
+version = "0.13.0"
 
 [deps]
 Adapt = "79e6a3ab-5dfb-504d-930d-738a2a938a0e"

benchmarks/bickleyjet/Manifest.toml

@@ -91,9 +91,9 @@ uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f"
 
 [[deps.BenchmarkTools]]
 deps = ["JSON", "Logging", "Printf", "Profile", "Statistics", "UUIDs"]
-git-tree-sha1 = "f1f03a9fa24271160ed7e73051fba3c1a759b53f"
+git-tree-sha1 = "f1dff6729bc61f4d49e140da1af55dcd1ac97b2f"
 uuid = "6e4b80f9-dd63-53aa-95a3-0cdb28fa8baf"
-version = "1.4.0"
+version = "1.5.0"
 
 [[deps.BitFlags]]
 git-tree-sha1 = "2dc09997850d68179b69dafb58ae806167a32b1b"
@@ -149,9 +149,9 @@ version = "1.16.1+1"
 
 [[deps.ChainRulesCore]]
 deps = ["Compat", "LinearAlgebra"]
-git-tree-sha1 = "aef70bb349b20aa81a82a19704c3ef339d4ee494"
+git-tree-sha1 = "575cd02e080939a33b6df6c5853d14924c08e35b"
 uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
-version = "1.22.1"
+version = "1.23.0"
 weakdeps = ["SparseArrays"]
 
     [deps.ChainRulesCore.extensions]
@@ -167,7 +167,7 @@ version = "0.5.7"
 deps = ["Adapt", "BandedMatrices", "BlockArrays", "CUDA", "ClimaComms", "CubedSphere", "DataStructures", "DocStringExtensions", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "KrylovKit", "LinearAlgebra", "PkgVersion", "RecursiveArrayTools", "RootSolvers", "SparseArrays", "Static", "StaticArrays", "Statistics", "Unrolled"]
 path = "../.."
 uuid = "d414da3d-4745-48bb-8d80-42e94e092884"
-version = "0.12.0"
+version = "0.13.0"
 
     [deps.ClimaCore.extensions]
     KrylovExt = "Krylov"
@@ -217,9 +217,9 @@ version = "0.3.0"
 
 [[deps.Compat]]
 deps = ["TOML", "UUIDs"]
-git-tree-sha1 = "d2c021fbdde94f6cdaa799639adfeeaa17fd67f5"
+git-tree-sha1 = "c955881e3c981181362ae4088b35995446298b80"
 uuid = "34da2185-b29b-5c13-b0c7-acf172513d20"
-version = "4.13.0"
+version = "4.14.0"
 weakdeps = ["Dates", "LinearAlgebra"]
 
     [deps.Compat.extensions]
@@ -384,10 +384,10 @@ uuid = "a3f928ae-7b40-5064-980b-68af3947d34b"
 version = "2.13.93+0"
 
 [[deps.Formatting]]
-deps = ["Printf"]
-git-tree-sha1 = "8339d61043228fdd3eb658d86c926cb282ae72a8"
+deps = ["Logging", "Printf"]
+git-tree-sha1 = "fb409abab2caf118986fc597ba84b50cbaf00b87"
 uuid = "59287772-0a20-5a39-b81b-1366585eb4c0"
-version = "0.4.2"
+version = "0.4.3"
 
 [[deps.ForwardDiff]]
 deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "LinearAlgebra", "LogExpFunctions", "NaNMath", "Preferences", "Printf", "Random", "SpecialFunctions"]
@@ -577,9 +577,9 @@ version = "3.0.2+0"
 
 [[deps.KernelAbstractions]]
 deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "Requires", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"]
-git-tree-sha1 = "4e0cb2f5aad44dcfdc91088e85dee4ecb22c791c"
+git-tree-sha1 = "c7753cc3febe006708ce6798482004241f7d890b"
 uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c"
-version = "0.9.16"
+version = "0.9.17"
 
     [deps.KernelAbstractions.extensions]
     EnzymeExt = "EnzymeCore"
@@ -726,10 +726,10 @@ uuid = "89763e89-9b03-5906-acba-b20f662cd828"
 version = "4.5.1+1"
 
 [[deps.Libuuid_jll]]
-deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
-git-tree-sha1 = "7f3efec06033682db852f8b3bc3c1d2b0a0ab066"
+deps = ["Artifacts", "JLLWrappers", "Libdl"]
+git-tree-sha1 = "e5edc369a598dfde567269dc6add5812cfa10cd5"
 uuid = "38a345b3-de98-5d2b-a5d3-14cd9215e700"
-version = "2.36.0+0"
+version = "2.39.3+0"
 
 [[deps.LinearAlgebra]]
 deps = ["Libdl", "OpenBLAS_jll", "libblastrampoline_jll"]
@@ -977,9 +977,9 @@ version = "1.2.0"
 
 [[deps.Preferences]]
 deps = ["TOML"]
-git-tree-sha1 = "00805cd429dcb4870060ff49ef443486c262e38e"
+git-tree-sha1 = "9e8fed0505b0c15b4c1295fd59ea47b411c019cf"
 uuid = "21216c6a-2e73-6563-6e65-726566657250"
-version = "1.4.1"
+version = "1.4.2"
 
 [[deps.Printf]]
 deps = ["Unicode"]
@@ -1035,9 +1035,9 @@ version = "0.6.12"
 
 [[deps.RecursiveArrayTools]]
 deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "SparseArrays", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"]
-git-tree-sha1 = "1bbc4bb050165cc57ca2876cd53cc23395948650"
+git-tree-sha1 = "dc428bb59c20dafd1ec500c3432b9e3d7e78e7f3"
 uuid = "731186ca-8d62-57ce-b412-fbd966d074cd"
-version = "3.10.0"
+version = "3.10.1"
 
     [deps.RecursiveArrayTools.extensions]
     RecursiveArrayToolsFastBroadcastExt = "FastBroadcast"
@@ -1177,9 +1177,9 @@ uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c"
 version = "7.2.1+1"
 
 [[deps.SymbolicIndexingInterface]]
-git-tree-sha1 = "b74cb9508b6c0aa91d729dcbc7e35faf8998c549"
+git-tree-sha1 = "251bb311585143931a306175c3b7ced220300578"
 uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5"
-version = "0.3.7"
+version = "0.3.8"
 
 [[deps.TOML]]
 deps = ["Dates"]
@@ -1320,9 +1320,9 @@ version = "1.31.0+0"
 
 [[deps.XML2_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Zlib_jll"]
-git-tree-sha1 = "801cbe47eae69adc50f36c3caec4758d2650741b"
+git-tree-sha1 = "07e470dabc5a6a4254ffebc29a1b3fc01464e105"
 uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a"
-version = "2.12.2+0"
+version = "2.12.5+0"
 
 [[deps.XSLT_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "Pkg", "XML2_jll", "Zlib_jll"]
@@ -1332,9 +1332,9 @@ version = "1.1.34+0"
 
 [[deps.XZ_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
-git-tree-sha1 = "ac88fb95ae6447c8dda6a5503f3bafd496ae8632"
+git-tree-sha1 = "37195dcb94a5970397ad425b95a9a26d0befce3a"
 uuid = "ffd25f8a-64ca-5728-b0f7-c24cf3aae800"
-version = "5.4.6+0"
+version = "5.6.0+0"
 
 [[deps.Xorg_libICE_jll]]
 deps = ["Libdl", "Pkg"]
@@ -1511,9 +1511,9 @@ version = "3.1.1+0"
 
 [[deps.libaec_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
-git-tree-sha1 = "eddd19a8dea6b139ea97bdc8a0e2667d4b661720"
+git-tree-sha1 = "46bf7be2917b59b761247be3f317ddf75e50e997"
 uuid = "477f73a3-ac25-53e9-8cc3-50b2fa2566f0"
-version = "1.0.6+1"
+version = "1.1.2+0"
 
 [[deps.libaom_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
@@ -1552,9 +1552,9 @@ version = "1.18.0+0"
 
 [[deps.libpng_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Zlib_jll"]
-git-tree-sha1 = "873b4f805771d3e4bafe63af759a26ea8ca84d14"
+git-tree-sha1 = "1ea2ebe8ffa31f9c324e8c1d6e86b4165b84a024"
 uuid = "b53b4c65-9356-5827-b1ea-8c7a1a84506f"
-version = "1.6.42+0"
+version = "1.6.43+0"
 
 [[deps.libvorbis_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Ogg_jll", "Pkg"]