Update manifests

CliMA · Oct 2, 2023 · 3c9202c · 3c9202c
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commit 3c9202c
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Showing 5 changed files with 224 additions and 155 deletions.
diff --git a/benchmarks/bickleyjet/Manifest.toml b/benchmarks/bickleyjet/Manifest.toml
@@ -484,9 +484,9 @@ version = "1.0.2"
 
 [[deps.HDF5]]
 deps = ["Compat", "HDF5_jll", "Libdl", "MPIPreferences", "Mmap", "Preferences", "Printf", "Random", "Requires", "UUIDs"]
-git-tree-sha1 = "ec7df74b7b2022e8252a8bfd4ec23411491adc3b"
+git-tree-sha1 = "26407bd1c60129062cec9da63dc7d08251544d53"
 uuid = "f67ccb44-e63f-5c2f-98bd-6dc0ccc4ba2f"
-version = "0.17.0"
+version = "0.17.1"
 weakdeps = ["MPI"]
 
     [deps.HDF5.extensions]
@@ -612,15 +612,15 @@ version = "3.0.0+1"
 
 [[deps.LLVM]]
 deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"]
-git-tree-sha1 = "a9d2ce1d5007b1e8f6c5b89c5a31ff8bd146db5c"
+git-tree-sha1 = "4ea2928a96acfcf8589e6cd1429eff2a3a82c366"
 uuid = "929cbde3-209d-540e-8aea-75f648917ca0"
-version = "6.2.1"
+version = "6.3.0"
 
 [[deps.LLVMExtra_jll]]
 deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"]
-git-tree-sha1 = "7ca6850ae880cc99b59b88517545f91a52020afa"
+git-tree-sha1 = "e7c01b69bcbcb93fd4cbc3d0fea7d229541e18d2"
 uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab"
-version = "0.0.25+0"
+version = "0.0.26+0"
 
 [[deps.LLVMOpenMP_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
@@ -822,9 +822,9 @@ version = "0.3.2"
 
 [[deps.MicrosoftMPI_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
-git-tree-sha1 = "a8027af3d1743b3bfae34e54872359fdebb31422"
+git-tree-sha1 = "a7023883872e52bc29bcaac74f19adf39347d2d5"
 uuid = "9237b28f-5490-5468-be7b-bb81f5f5e6cf"
-version = "10.1.3+4"
+version = "10.1.4+0"
 
 [[deps.Missings]]
 deps = ["DataAPI"]
@@ -879,9 +879,9 @@ version = "0.8.1+0"
 
 [[deps.OpenMPI_jll]]
 deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"]
-git-tree-sha1 = "f3080f4212a8ba2ceb10a34b938601b862094314"
+git-tree-sha1 = "e25c1778a98e34219a00455d6e4384e017ea9762"
 uuid = "fe0851c0-eecd-5654-98d4-656369965a5c"
-version = "4.1.5+0"
+version = "4.1.6+0"
 
 [[deps.OpenSSL]]
 deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"]
@@ -1343,9 +1343,9 @@ version = "1.25.0+0"
 
 [[deps.XML2_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Zlib_jll"]
-git-tree-sha1 = "04a51d15436a572301b5abbb9d099713327e9fc4"
+git-tree-sha1 = "24b81b59bd35b3c42ab84fa589086e19be919916"
 uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a"
-version = "2.10.4+0"
+version = "2.11.5+0"
 
 [[deps.XSLT_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "Pkg", "XML2_jll", "Zlib_jll"]

diff --git a/docs/Manifest.toml b/docs/Manifest.toml
@@ -468,9 +468,9 @@ version = "1.9.1"
 
 [[deps.DiffEqBase]]
 deps = ["ArrayInterface", "ChainRulesCore", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces", "ZygoteRules"]
-git-tree-sha1 = "dc50f5ef15406701057895deda051f82e53d5773"
+git-tree-sha1 = "22ab786efaef7b9ccb66a272d7cc2471bea76ba9"
 uuid = "2b5f629d-d688-5b77-993f-72d75c75574e"
-version = "6.130.2"
+version = "6.130.4"
 
     [deps.DiffEqBase.extensions]
     DiffEqBaseDistributionsExt = "Distributions"
@@ -832,9 +832,9 @@ version = "0.5.3"
 
 [[deps.GeoInterface]]
 deps = ["Extents"]
-git-tree-sha1 = "bb198ff907228523f3dee1070ceee63b9359b6ab"
+git-tree-sha1 = "d53480c0793b13341c40199190f92c611aa2e93c"
 uuid = "cf35fbd7-0cd7-5166-be24-54bfbe79505f"
-version = "1.3.1"
+version = "1.3.2"
 
 [[deps.GeometryBasics]]
 deps = ["EarCut_jll", "Extents", "GeoInterface", "IterTools", "LinearAlgebra", "StaticArrays", "StructArrays", "Tables"]
@@ -873,9 +873,9 @@ version = "1.3.14+0"
 
 [[deps.Graphs]]
 deps = ["ArnoldiMethod", "Compat", "DataStructures", "Distributed", "Inflate", "LinearAlgebra", "Random", "SharedArrays", "SimpleTraits", "SparseArrays", "Statistics"]
-git-tree-sha1 = "1cf1d7dcb4bc32d7b4a5add4232db3750c27ecb4"
+git-tree-sha1 = "899050ace26649433ef1af25bc17a815b3db52b7"
 uuid = "86223c79-3864-5bf0-83f7-82e725a168b6"
-version = "1.8.0"
+version = "1.9.0"
 
 [[deps.GridLayoutBase]]
 deps = ["GeometryBasics", "InteractiveUtils", "Observables"]
@@ -890,9 +890,9 @@ version = "1.0.2"
 
 [[deps.HDF5]]
 deps = ["Compat", "HDF5_jll", "Libdl", "MPIPreferences", "Mmap", "Preferences", "Printf", "Random", "Requires", "UUIDs"]
-git-tree-sha1 = "ec7df74b7b2022e8252a8bfd4ec23411491adc3b"
+git-tree-sha1 = "26407bd1c60129062cec9da63dc7d08251544d53"
 uuid = "f67ccb44-e63f-5c2f-98bd-6dc0ccc4ba2f"
-version = "0.17.0"
+version = "0.17.1"
 weakdeps = ["MPI"]
 
     [deps.HDF5.extensions]
@@ -1140,15 +1140,15 @@ version = "3.0.0+1"
 
 [[deps.LLVM]]
 deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"]
-git-tree-sha1 = "a9d2ce1d5007b1e8f6c5b89c5a31ff8bd146db5c"
+git-tree-sha1 = "4ea2928a96acfcf8589e6cd1429eff2a3a82c366"
 uuid = "929cbde3-209d-540e-8aea-75f648917ca0"
-version = "6.2.1"
+version = "6.3.0"
 
 [[deps.LLVMExtra_jll]]
 deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"]
-git-tree-sha1 = "7ca6850ae880cc99b59b88517545f91a52020afa"
+git-tree-sha1 = "e7c01b69bcbcb93fd4cbc3d0fea7d229541e18d2"
 uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab"
-version = "0.0.25+0"
+version = "0.0.26+0"
 
 [[deps.LLVMOpenMP_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
@@ -1468,9 +1468,9 @@ version = "0.3.2"
 
 [[deps.MicrosoftMPI_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
-git-tree-sha1 = "a8027af3d1743b3bfae34e54872359fdebb31422"
+git-tree-sha1 = "a7023883872e52bc29bcaac74f19adf39347d2d5"
 uuid = "9237b28f-5490-5468-be7b-bb81f5f5e6cf"
-version = "10.1.3+4"
+version = "10.1.4+0"
 
 [[deps.Missings]]
 deps = ["DataAPI"]
@@ -1559,10 +1559,10 @@ uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908"
 version = "1.2.0"
 
 [[deps.NonlinearSolve]]
-deps = ["ArrayInterface", "DiffEqBase", "EnumX", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "LinearSolve", "PrecompileTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"]
-git-tree-sha1 = "e10debcea868cd6e51249e8eeaf191c25f68a640"
+deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "EnumX", "FiniteDiff", "ForwardDiff", "LineSearches", "LinearAlgebra", "LinearSolve", "PrecompileTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"]
+git-tree-sha1 = "7032be911404fe667e2a7ccd464ba5f2532797f2"
 uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec"
-version = "1.10.1"
+version = "2.0.1"
 
 [[deps.Observables]]
 git-tree-sha1 = "6862738f9796b3edc1c09d0890afce4eca9e7e93"
@@ -1611,9 +1611,9 @@ version = "0.8.1+0"
 
 [[deps.OpenMPI_jll]]
 deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"]
-git-tree-sha1 = "f3080f4212a8ba2ceb10a34b938601b862094314"
+git-tree-sha1 = "e25c1778a98e34219a00455d6e4384e017ea9762"
 uuid = "fe0851c0-eecd-5654-98d4-656369965a5c"
-version = "4.1.5+0"
+version = "4.1.6+0"
 
 [[deps.OpenSSL]]
 deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"]
@@ -1652,9 +1652,9 @@ version = "1.6.2"
 
 [[deps.OrdinaryDiffEq]]
 deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "InteractiveUtils", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLNLSolve", "SciMLOperators", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"]
-git-tree-sha1 = "ede6c2334cb30bc83a450b282c10d0ae82fc122e"
+git-tree-sha1 = "16d4feaf7e17ac63cb6bb742b0a4dfd50d1ef458"
 uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed"
-version = "6.56.0"
+version = "6.57.0"
 
 [[deps.PCRE2_jll]]
 deps = ["Artifacts", "Libdl"]
@@ -1663,9 +1663,9 @@ version = "10.42.0+0"
 
 [[deps.PDMats]]
 deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"]
-git-tree-sha1 = "bf6085e8bd7735e68c210c6e5d81f9a6fe192060"
+git-tree-sha1 = "b7c4f29f93b548caa58f703580f4d79ab753c8ac"
 uuid = "90014a1f-27ba-587c-ab20-58faa44d9150"
-version = "0.11.19"
+version = "0.11.21"
 
 [[deps.PNGFiles]]
 deps = ["Base64", "CEnum", "ImageCore", "IndirectArrays", "OffsetArrays", "libpng_jll"]
@@ -1765,9 +1765,9 @@ version = "1.39.0"
 
 [[deps.Polyester]]
 deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StaticArrayInterface", "StrideArraysCore", "ThreadingUtilities"]
-git-tree-sha1 = "d4c9ebdc6528a4aaf7cfcf43b482e927267b400d"
+git-tree-sha1 = "c7dc9720390fcc296bf757b3f833f9e41c68a086"
 uuid = "f517fe37-dbe3-4b94-8317-1923a5111588"
-version = "0.7.6"
+version = "0.7.7"
 
 [[deps.PolyesterWeave]]
 deps = ["BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "Static", "ThreadingUtilities"]
@@ -2026,9 +2026,9 @@ version = "0.6.39"
 
 [[deps.SciMLBase]]
 deps = ["ADTypes", "ArrayInterface", "ChainRulesCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces", "ZygoteRules"]
-git-tree-sha1 = "fd34cc828616e35d4a86a24eb290186db2956f68"
+git-tree-sha1 = "e7c518184850701c91df0e898241c07e03c7f367"
 uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
-version = "2.0.4"
+version = "2.0.7"
 
     [deps.SciMLBase.extensions]
     ZygoteExt = "Zygote"
@@ -2381,9 +2381,9 @@ version = "0.5.2"
 
 [[deps.TiffImages]]
 deps = ["ColorTypes", "DataStructures", "DocStringExtensions", "FileIO", "FixedPointNumbers", "IndirectArrays", "Inflate", "Mmap", "OffsetArrays", "PkgVersion", "ProgressMeter", "UUIDs"]
-git-tree-sha1 = "b7dc44cb005a7ef743b8fe98970afef003efdce7"
+git-tree-sha1 = "7fd97bd1c5b1ff53a291cbd351d1d3d6ff4da5a5"
 uuid = "731e570b-9d59-4bfa-96dc-6df516fadf69"
-version = "0.6.6"
+version = "0.6.7"
 
 [[deps.TimerOutputs]]
 deps = ["ExprTools", "Printf"]
@@ -2532,9 +2532,9 @@ version = "1.18.0"
 
 [[deps.XML2_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Zlib_jll"]
-git-tree-sha1 = "04a51d15436a572301b5abbb9d099713327e9fc4"
+git-tree-sha1 = "24b81b59bd35b3c42ab84fa589086e19be919916"
 uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a"
-version = "2.10.4+0"
+version = "2.11.5+0"
 
 [[deps.XSLT_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "Pkg", "XML2_jll", "Zlib_jll"]