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ApPredict for use with Chaste 2019.1
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@mirams mirams released this 13 Sep 15:37
v2019.1
c2bd9ff

This version of ApPredict is compatible with Chaste 2019.1 which can be downloaded here.

Release Notes

As with Chaste, ApPredict is now compiled with C++14, so dependencies are a bit newer.

Speed

Solution of the O'Hara-Rudy 2011 and O'Hara-Rudy-CiPA 2017 models has been speeded up considerably (40-50%) by using a two-step solve process which resets the solver before and after the pacing stimulus is applied. Minor improvements for other models too. Although I've also made solver tolerances a bit finer, which helps steady-state detection, but means not much change to speed overall.

Otherwise minor changes to lookup table manifest file handling for uncertainty quantification. A fresh copy of lookup tables available on the server is downloaded whenever we have web access.

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