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chore: remove Python 3.8 support #11

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Dec 20, 2024
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[pre-commit.ci] auto fixes from pre-commit.com hooks
for more information, see https://pre-commit.ci
pre-commit-ci[bot] committed Dec 20, 2024
commit 65c871f7a0dc8cf05415082086ddb0670177799c
12 changes: 9 additions & 3 deletions src/genomicarrays/GenomicArrayDataset.py
Original file line number Diff line number Diff line change
@@ -8,10 +8,16 @@

.. code-block:: python

from genomicarray import GenomicArrayDataset
from genomicarray import (
GenomicArrayDataset,
)

garr = GenomicArrayDataset(dataset_path="/path/to/genomicarray/dir")
result1 = garr[0:10, 0]
garr = GenomicArrayDataset(
dataset_path="/path/to/genomicarray/dir"
)
result1 = garr[
0:10, 0
]

print(result1)
"""
17 changes: 13 additions & 4 deletions src/genomicarrays/GenomicArrayDatasetSlice.py
Original file line number Diff line number Diff line change
@@ -8,11 +8,20 @@

.. code-block:: python

from genomicarray import GenomicArrayDataset
from genomicarray import (
GenomicArrayDataset,
)

garr = GenomicArrayDataset(dataset_path="/path/to/genomicarray/dir")
feature_indices = slice(0, 10)
result1 = garr[feature_indices, 0]
garr = GenomicArrayDataset(
dataset_path="/path/to/genomicarray/dir"
)
feature_indices = (
slice(0, 10)
)
result1 = garr[
feature_indices,
0,
]

print(result1)
"""
4 changes: 3 additions & 1 deletion src/genomicarrays/dataloader.py
Original file line number Diff line number Diff line change
@@ -7,7 +7,9 @@

.. code-block:: python

from genomicarrays.dataloader import TorchDataset
from genomicarrays.dataloader import (
TorchDataset,
)

ds = TorchDataset(
dataset_path="/path/to/genarr/dir"