build failed #131
Comments
|
Paul, it failed to make the directory |
|
I'm onto it - I think I know what the problem is. Won't take long to fix. |
|
Attached is the output from the build.
P
…On Tue, Jan 29, 2019 at 4:23 PM Andrew Kiss ***@***.***> wrote:
I'm onto it - I think I know what the problem is. Won't take long to fix.
—
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<#131 (comment)>,
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.
--
Paul Spence, PhD
Senior Lecturer, Climate Change Research Centre
University of New South Wales
Sydney, Australia
[email protected]
pas561@raijin4 access-om2]$ ./install.sh
./install.sh
Installing ACCESS-OM2 in /short/v45/pas561/access-om2
Removing previous executables (if any)...
rm: cannot remove `/short/v45/pas561/access-om2/src/mom/exec/nci/ACCESS-OM/fms_ACCESS-OM.x': No such file or directory
rm: cannot remove `/short/v45/pas561/access-om2/src/libaccessom2/build/bin/yatm.exe': No such file or directory
rm: cannot remove `/short/v45/pas561/access-om2/src/cice5/build_auscom_360x300_24p/cice_auscom_360x300_24p.exe': No such file or directory
rm: cannot remove `/short/v45/pas561/access-om2/src/cice5/build_auscom_1440x1080_480p/cice_auscom_1440x1080_480p.exe': No such file or directory
rm: cannot remove `/short/v45/pas561/access-om2/src/cice5/build_auscom_3600x2700_1392p/cice_auscom_3600x2700_1392p.exe': No such file or directory
Compiling YATM file-based atmosphere and libaccessom2...
-- The Fortran compiler identification is Intel 17.0.1.20161005
-- Check for working Fortran compiler: /apps/intel-ct/fc-wrapper/ifort
-- Check for working Fortran compiler: /apps/intel-ct/fc-wrapper/ifort -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /apps/intel-ct/fc-wrapper/ifort supports Fortran 90
-- Checking whether /apps/intel-ct/fc-wrapper/ifort supports Fortran 90 -- yes
mpifort executable found:
Will assume system MPI implementation is sound. Remove mpifort from PATH to automatically configure MPI
-- Found NetCDF: /apps/netcdf/4.4.1.1/lib/libnetcdff.so;/apps/netcdf/4.4.1.1/lib/libnetcdf.so
-- Configuring done
-- Generating done
-- Build files have been written to: /short/v45/pas561/access-om2/src/libaccessom2/build
Scanning dependencies of target oasis3-mct
[ 2%] Creating directories for 'oasis3-mct'
[ 4%] Performing download step (git clone) for 'oasis3-mct'
Initialized empty Git repository in /short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/.git/
Note: checking out '3dd0d4cf2947dbad8928b7f2803da5e20970fa13'.
You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by performing another checkout.
If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -b with the checkout command again. Example:
git checkout -b new_branch_name
HEAD is now at 3dd0d4c... Merge pull request #10 from OceansAus/anytarget
[ 6%] No patch step for 'oasis3-mct'
[ 8%] Performing update step for 'oasis3-mct'
[ 10%] No configure step for 'oasis3-mct'
[ 12%] Performing build step for 'oasis3-mct'
make[5]: warning: jobserver unavailable: using -j1. Add `+' to parent make rule.
make[5]: warning: jobserver unavailable: using -j1. Add `+' to parent make rule.
=> Compiling library mpeu and mct
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether mpicc accepts -g... yes
checking for mpicc option to accept ISO C89... none needed
checking how to run the C preprocessor... mpicc -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking whether byte ordering is bigendian... no
checking whether we are using the GNU Fortran compiler... no
checking whether mpifort accepts -g... yes
checking for Fortran flag to compile .F90 files... none
checking for mpif90... mpifort
checking for MPI_Init... yes
checking for mpif.h... yes
Checking Compiler Version
checking how to get the version output from mpifort... -V
checking for Fortran flag to compile preprocessed .F files... none
checking how to define symbols for preprocessed Fortran... -D
checking how to get verbose linking output from mpifort... -v
checking for Fortran libraries of mpifort... -L/just/a/flag/for/intel -L/apps/openmpi/1.10.2/lib/Intel -L/apps/openmpi/1.10.2/lib -L/apps/openmpi/1.10.2/lib/profilers -L/apps/netcdf/4.2.1.1/lib/Intel -L/apps/netcdf/4.2.1.1/lib -L/apps/intel-ct/17.0.1.132/cc/../common/lib -L/apps/intel-ct/17.0.1.132/fc/../common/lib -L/apps/intel/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64_lin -L/plush/dugong/usr/bin/../lib/gcc/x86_64-redhat-linux/4.4.7/ -L/plush/dugong/usr/bin/../lib/gcc/ -L/usr/lib/gcc/x86_64-redhat-linux/4.4.7/ -L/plush/dugong/usr/bin/../lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64 -L/plush/dugong/usr/bin/../lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64/ -L/lib/../lib64 -L/lib/../lib64/ -L/usr/lib/../lib64 -L/usr/lib/../lib64/ -L/apps/openmpi/1.10.2/lib/Intel/ -L/apps/openmpi/1.10.2/lib/GNU/ -L/apps/openmpi/1.10.2/lib/ -L/apps/openmpi/1.10.2/lib/profilers/ -L/apps/netcdf/4.2.1.1/lib/Intel/ -L/apps/netcdf/4.2.1.1/lib/GNU/ -L/apps/netcdf/4.2.1.1/lib/ -L/apps/intel-ct/17.0.1.132/cc/../common/lib/ -L/apps/intel-ct/17.0.1.132/fc/../common/lib/ -L/plush/dugong/usr/bin/../lib/gcc/x86_64-redhat-linux/4.4.7/../../../ -L/lib64 -L/lib/ -L/usr/lib64 -L/usr/lib -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lifport -lifcoremt -limf -lsvml -lm -lipgo -lirc -lpthread -lirc_s -ldl
checking for dummy main to link with Fortran libraries... none
checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore
Hostname=raijin4
Machine=x86_64
OS=Linux
Fortran Compiler is Intel ifort
Output Variables: {CC=mpicc} {CFLAGS=-g -O2} {FC=mpifort} {FCFLAGS=-O3 -xHost -ip -align all} {PROGFCFLAGS=-assume byterecl}{CPPDEFS= -DSYSLINUX -DCPRINTEL} {OPT=-O2} {DEBUG=} {REAL8=-r8} {BIT64=} {ENDIAN=-convert big_endian} {MPIFC=mpifort} {MPILIBS=} {MPIHEADER=} {INCLUDEFLAG=-I} {INCLUDEPATH=} {AR=ar cq} {BABELROOT=} {COMPILER_ROOT=} {PYTHON=} {PYTHONOPTS=} {FORT_SIZE=} {prefix=NONE} {SRCDIR=} {FC_DEFINE=-D}
configure: creating ./config.status
config.status: creating Makefile.conf
config.status: creating config.h
Please check the Makefile.conf
Have a nice day!
m_AttrVect.F90(2498): remark #5140: Unrecognized directive
!DIR$ CONCURRENT
----------------^
m_AttrVect.F90(2508): remark #5140: Unrecognized directive
!DIR$ CONCURRENT
----------------^
m_AttrVect.F90(2519): remark #5140: Unrecognized directive
!DIR$ CONCURRENT
----------------^
m_AttrVect.F90(2678): remark #5140: Unrecognized directive
!DIR$ CONCURRENT
----------------^
m_AttrVect.F90(2688): remark #5140: Unrecognized directive
!DIR$ CONCURRENT
----------------^
m_AttrVect.F90(2699): remark #5140: Unrecognized directive
!DIR$ CONCURRENT
----------------^
m_AttrVect.F90(2838): remark #5140: Unrecognized directive
!DIR$ CONCURRENT
----------------^
m_AttrVect.F90(2848): remark #5140: Unrecognized directive
!DIR$ CONCURRENT
----------------^
m_AttrVect.F90(2859): remark #5140: Unrecognized directive
!DIR$ CONCURRENT
----------------^
m_AttrVect.F90(3017): remark #5140: Unrecognized directive
!DIR$ CONCURRENT
----------------^
m_AttrVect.F90(3027): remark #5140: Unrecognized directive
!DIR$ CONCURRENT
----------------^
m_AttrVect.F90(3038): remark #5140: Unrecognized directive
!DIR$ CONCURRENT
----------------^
m_SpatialIntegralV.F90(716): remark #8291: Recommended relationship between field width 'W' and the number of fractional digits 'D' in this edit descriptor is 'W>=D+7'.
write(stderr,'(3a,i8,a,e10.6)') myname_, &
-----------------------------------------^
m_SpatialIntegralV.F90(959): remark #8291: Recommended relationship between field width 'W' and the number of fractional digits 'D' in this edit descriptor is 'W>=D+7'.
write(stderr,'(3a,i8,a,e10.6)') myname_, &
-----------------------------------------^
m_Rearranger.F90(1051): remark #5140: Unrecognized directive
!DIR$ CONCURRENT
----------------^
m_Rearranger.F90(1052): remark #5140: Unrecognized directive
!DIR$ PREFERVECTOR
------------------^
m_Rearranger.F90(1063): remark #5140: Unrecognized directive
!DIR$ CONCURRENT
----------------^
m_Rearranger.F90(1064): remark #5140: Unrecognized directive
!DIR$ PREFERVECTOR
------------------^
m_MatAttrVectMul.F90(240): remark #5140: Unrecognized directive
!DIR$ CONCURRENT
----------------^
m_MatAttrVectMul.F90(244): remark #5140: Unrecognized directive
!DIR$ CONCURRENT
----------------^
m_MatAttrVectMul.F90(264): remark #5140: Unrecognized directive
!DIR$ CONCURRENT
----------------^
m_MatAttrVectMul.F90(363): remark #5140: Unrecognized directive
!DIR$ CONCURRENT
----------------^
m_MatAttrVectMul.F90(379): remark #5140: Unrecognized directive
!DIR$ CONCURRENT
----------------^
make[5]: warning: jobserver unavailable: using -j1. Add `+' to parent make rule.
=> Compiling library scrip
/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/lib/scrip/src/remap_conserv.F(534): remark #8291: Recommended relationship between field width 'W' and the number of fractional digits 'D' in this edit descriptor is 'W>=D+7'.
& 1X,I8,1X,I8,1X,F12.8,1X,F12.8,1X,F12.8,1X,F12.8, E12.8)
-----------------------------------------------------------------^
/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/lib/scrip/src/remap_conserv.F(532): remark #8291: Recommended relationship between field width 'W' and the number of fractional digits 'D' in this edit descriptor is 'W>=D+7'.
& 1X,I8,1X,I8,1X,F12.8,1X,F12.8,1X,F12.8,1X,F12.8, E12.8)
-----------------------------------------------------------------^
/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/lib/scrip/src/remap_conserv.F(530): remark #8291: Recommended relationship between field width 'W' and the number of fractional digits 'D' in this edit descriptor is 'W>=D+7'.
& 1X,I8,1X,I8,1X,F12.8,1X,F12.8,1X,F12.8,1X,F12.8, E12.8)
-----------------------------------------------------------------^
ar: creating /short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/lib/libscrip.a
a - mod_oasis_flush.o
a - remap_bicubic_reduced.o
a - netcdf.o
a - remap_conserv.o
a - remap_distwgt.o
a - remap_vars.o
a - scrip.o
a - constants.o
a - distance.o
a - fracnnei.o
a - gradient_bicubic.o
a - grids.o
a - iounits.o
a - kinds_mod.o
a - remap_bicubic.o
a - remap_bilinear.o
a - remap_bilinear_reduced.o
a - remap_gauswgt.o
a - remap_write.o
a - timers.o
make[5]: warning: jobserver unavailable: using -j1. Add `+' to parent make rule.
=> Compiling library psmile
ar: creating /short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/lib/libpsmile.MPI1.a
a - mod_oasis.o
a - mod_oasis_advance.o
a - mod_oasis_coupler.o
a - mod_oasis_data.o
a - mod_oasis_getput_interface.o
a - mod_oasis_grid.o
a - mod_oasis_io.o
a - mod_oasis_ioshr.o
a - mod_oasis_kinds.o
a - mod_oasis_method.o
a - mod_oasis_mpi.o
a - mod_oasis_namcouple.o
a - mod_oasis_parameters.o
a - mod_oasis_part.o
a - mod_oasis_string.o
a - mod_oasis_sys.o
a - mod_oasis_timer.o
a - mod_oasis_var.o
a - mod_prism.o
[ 14%] Performing install step for 'oasis3-mct'
Skipping json-fortran install step.
[ 16%] Completed 'oasis3-mct'
[ 16%] Built target oasis3-mct
Scanning dependencies of target datetime-fortran
[ 18%] Creating directories for 'datetime-fortran'
[ 20%] Performing download step (git clone) for 'datetime-fortran'
Initialized empty Git repository in /short/v45/pas561/access-om2/src/libaccessom2/build/datetime-fortran-prefix/src/datetime-fortran/.git/
Note: checking out '3e7755c585cdc62ed262e91d57e7d54f82046087'.
You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by performing another checkout.
If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -b with the checkout command again. Example:
git checkout -b new_branch_name
HEAD is now at 3e7755c... Make debug build by default. Still experiencing weirdness with optimised builds.
[ 22%] No patch step for 'datetime-fortran'
[ 24%] Performing update step for 'datetime-fortran'
[ 26%] Performing configure step for 'datetime-fortran'
-- The Fortran compiler identification is Intel 17.0.1.20161005
-- Check for working Fortran compiler: /apps/intel-ct/fc-wrapper/ifort
-- Check for working Fortran compiler: /apps/intel-ct/fc-wrapper/ifort -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /apps/intel-ct/fc-wrapper/ifort supports Fortran 90
-- Checking whether /apps/intel-ct/fc-wrapper/ifort supports Fortran 90 -- yes
-- Configuring done
-- Generating done
-- Build files have been written to: /short/v45/pas561/access-om2/src/libaccessom2/build/datetime-fortran-prefix/src/datetime-fortran-build
[ 28%] Performing build step for 'datetime-fortran'
Scanning dependencies of target datetime
[ 11%] Building Fortran object CMakeFiles/datetime.dir/src/lib/mod_constants.f90.o
[ 22%] Building Fortran object CMakeFiles/datetime.dir/src/lib/mod_strftime.f90.o
[ 33%] Building Fortran object CMakeFiles/datetime.dir/src/lib/mod_timedelta.f90.o
[ 44%] Building Fortran object CMakeFiles/datetime.dir/src/lib/mod_datetime.f90.o
[ 55%] Building Fortran object CMakeFiles/datetime.dir/src/lib/mod_clock.f90.o
[ 66%] Building Fortran object CMakeFiles/datetime.dir/src/lib/datetime.f90.o
[ 77%] Linking Fortran static library lib/libdatetime.a
[ 77%] Built target datetime
Scanning dependencies of target datetime_tests
[ 88%] Building Fortran object CMakeFiles/datetime_tests.dir/src/tests/datetime_tests.f90.o
[100%] Linking Fortran executable bin/datetime_tests
[100%] Built target datetime_tests
[ 30%] Performing install step for 'datetime-fortran'
Skipping datetime-fortran install step.
[ 32%] Completed 'datetime-fortran'
[ 32%] Built target datetime-fortran
Scanning dependencies of target couple
[ 34%] Building Fortran object CMakeFiles/couple.dir/libcouple/src/error_handler.F90.o
[ 36%] Building Fortran object CMakeFiles/couple.dir/libcouple/src/logger.F90.o
[ 38%] Building Fortran object CMakeFiles/couple.dir/libcouple/src/util.F90.o
[ 40%] Building Fortran object CMakeFiles/couple.dir/libcouple/src/ncvar.F90.o
[ 42%] Building Fortran object CMakeFiles/couple.dir/libcouple/src/field.F90.o
[ 44%] Building Fortran object CMakeFiles/couple.dir/libcouple/src/coupler.F90.o
/short/v45/pas561/access-om2/src/libaccessom2/libcouple/src/coupler.F90(209): remark #8293: Recommended relationship between field width 'W', the number of fractional digits 'D' and the number of exponential digits 'E' in this edit descriptor is 'W>=D+E+5'.
write(checksum_str, '(E17.10E3)') sum(array)
-------------------------------^
[ 46%] Building Fortran object CMakeFiles/couple.dir/libcouple/src/libaccessom2_version.F90.o
[ 48%] Building Fortran object CMakeFiles/couple.dir/libcouple/src/accessom2.F90.o
[ 51%] Building Fortran object CMakeFiles/couple.dir/libcouple/src/restart.F90.o
[ 53%] Building Fortran object CMakeFiles/couple.dir/libcouple/src/simple_timer.F90.o
[ 55%] Linking Fortran static library lib/libcouple.a
[ 55%] Built target couple
Scanning dependencies of target json-fortran
[ 57%] Creating directories for 'json-fortran'
[ 59%] Performing download step (git clone) for 'json-fortran'
Initialized empty Git repository in /short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran/.git/
Note: checking out '37de3ade555e84779ebf8a26c23e86a3ae268390'.
You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by performing another checkout.
If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -b with the checkout command again. Example:
git checkout -b new_branch_name
HEAD is now at 37de3ad... prepare 6.1.0 release.
[ 61%] No patch step for 'json-fortran'
[ 63%] Performing update step for 'json-fortran'
[ 65%] Performing configure step for 'json-fortran'
-- The Fortran compiler identification is Intel 17.0.1.20161005
-- Check for working Fortran compiler: /apps/intel-ct/fc-wrapper/ifort
-- Check for working Fortran compiler: /apps/intel-ct/fc-wrapper/ifort -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /apps/intel-ct/fc-wrapper/ifort supports Fortran 90
-- Checking whether /apps/intel-ct/fc-wrapper/ifort supports Fortran 90 -- yes
-- CMake build configuration for JSON-Fortran 6.1.0
CMake Warning at CMakeLists.txt:220 (message):
FORD not found! Please set the CMake cache variable FORD to point to the
installed FORD executable, and reconfigure or disable building the
documentation. FORD can be installed from PYPI with `sudo pip install
FORD` or from <https://github.com/cmacmackin/ford> If you do not wish to
install FORD and build the JSON-Fortran documentation, then please set the
CMake cache variable SKIP_DOC_GEN to TRUE.
-- Configuring done
-- Generating done
-- Build files have been written to: /short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran-build
[ 67%] Performing build step for 'json-fortran'
Scanning dependencies of target jsonfortran-static
[ 7%] Building Fortran object CMakeFiles/jsonfortran-static.dir/src/json_kinds.F90.o
[ 14%] Building Fortran object CMakeFiles/jsonfortran-static.dir/src/json_parameters.F90.o
[ 21%] Building Fortran object CMakeFiles/jsonfortran-static.dir/src/json_string_utilities.F90.o
[ 28%] Building Fortran object CMakeFiles/jsonfortran-static.dir/src/json_value_module.F90.o
/short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran/src/json_value_module.F90(9051): remark #7712: This variable has not been used. [JSON]
subroutine json_value_create_array(json,p,name)
---------------------------------------^
/short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran/src/json_value_module.F90(9004): remark #7712: This variable has not been used. [JSON]
subroutine json_value_create_object(json,p,name)
----------------------------------------^
/short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran/src/json_value_module.F90(8954): remark #7712: This variable has not been used. [JSON]
subroutine json_value_create_null(json,p,name)
--------------------------------------^
/short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran/src/json_value_module.F90(8905): remark #7712: This variable has not been used. [JSON]
subroutine json_value_create_string(json,p,val,name)
----------------------------------------^
/short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran/src/json_value_module.F90(8856): remark #7712: This variable has not been used. [JSON]
subroutine json_value_create_double(json,p,val,name)
----------------------------------------^
/short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran/src/json_value_module.F90(8807): remark #7712: This variable has not been used. [JSON]
subroutine json_value_create_integer(json,p,val,name)
-----------------------------------------^
/short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran/src/json_value_module.F90(8759): remark #7712: This variable has not been used. [JSON]
subroutine json_value_create_logical(json,p,val,name)
-----------------------------------------^
/short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran/src/json_value_module.F90(8555): remark #7712: This variable has not been used. [JSON]
subroutine get_current_line_from_file_sequential(json,iunit,line)
-----------------------------------------------------^
/short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran/src/json_value_module.F90(1702): remark #7712: This variable has not been used. [JSON]
subroutine json_value_rename(json,p,name)
---------------------------------^
/short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran/src/json_value_module.F90(1076): remark #7712: This variable has not been used. [JSON]
subroutine json_clone(json,from,to)
--------------------------^
/short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran/src/json_value_module.F90(764): remark #7712: This variable has not been used. [ME]
subroutine destroy_json_core(me)
---------------------------------^
/short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran/src/json_value_module.F90(2421): remark #7712: This variable has not been used. [STATUS_OK2]
logical(LK) :: status_ok2 !! to check for a new exception
-------------------^
[ 35%] Building Fortran object CMakeFiles/jsonfortran-static.dir/src/json_file_module.F90.o
[ 42%] Building Fortran object CMakeFiles/jsonfortran-static.dir/src/json_module.F90.o
[ 50%] Linking Fortran static library lib/libjsonfortran.a
[ 50%] Built target jsonfortran-static
Scanning dependencies of target jsonfortran
[ 57%] Building Fortran object CMakeFiles/jsonfortran.dir/src/json_kinds.F90.o
[ 64%] Building Fortran object CMakeFiles/jsonfortran.dir/src/json_parameters.F90.o
[ 71%] Building Fortran object CMakeFiles/jsonfortran.dir/src/json_string_utilities.F90.o
[ 78%] Building Fortran object CMakeFiles/jsonfortran.dir/src/json_value_module.F90.o
/short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran/src/json_value_module.F90(9051): remark #7712: This variable has not been used. [JSON]
subroutine json_value_create_array(json,p,name)
---------------------------------------^
/short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran/src/json_value_module.F90(9004): remark #7712: This variable has not been used. [JSON]
subroutine json_value_create_object(json,p,name)
----------------------------------------^
/short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran/src/json_value_module.F90(8954): remark #7712: This variable has not been used. [JSON]
subroutine json_value_create_null(json,p,name)
--------------------------------------^
/short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran/src/json_value_module.F90(8905): remark #7712: This variable has not been used. [JSON]
subroutine json_value_create_string(json,p,val,name)
----------------------------------------^
/short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran/src/json_value_module.F90(8856): remark #7712: This variable has not been used. [JSON]
subroutine json_value_create_double(json,p,val,name)
----------------------------------------^
/short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran/src/json_value_module.F90(8807): remark #7712: This variable has not been used. [JSON]
subroutine json_value_create_integer(json,p,val,name)
-----------------------------------------^
/short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran/src/json_value_module.F90(8759): remark #7712: This variable has not been used. [JSON]
subroutine json_value_create_logical(json,p,val,name)
-----------------------------------------^
/short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran/src/json_value_module.F90(8555): remark #7712: This variable has not been used. [JSON]
subroutine get_current_line_from_file_sequential(json,iunit,line)
-----------------------------------------------------^
/short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran/src/json_value_module.F90(1702): remark #7712: This variable has not been used. [JSON]
subroutine json_value_rename(json,p,name)
---------------------------------^
/short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran/src/json_value_module.F90(1076): remark #7712: This variable has not been used. [JSON]
subroutine json_clone(json,from,to)
--------------------------^
/short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran/src/json_value_module.F90(764): remark #7712: This variable has not been used. [ME]
subroutine destroy_json_core(me)
---------------------------------^
/short/v45/pas561/access-om2/src/libaccessom2/build/json-fortran-prefix/src/json-fortran/src/json_value_module.F90(2421): remark #7712: This variable has not been used. [STATUS_OK2]
logical(LK) :: status_ok2 !! to check for a new exception
-------------------^
[ 85%] Building Fortran object CMakeFiles/jsonfortran.dir/src/json_file_module.F90.o
[ 92%] Building Fortran object CMakeFiles/jsonfortran.dir/src/json_module.F90.o
[100%] Linking Fortran shared library lib/libjsonfortran.so
[100%] Built target jsonfortran
[ 69%] Performing install step for 'json-fortran'
Skipping json-fortran install step.
[ 71%] Completed 'json-fortran'
[ 71%] Built target json-fortran
Scanning dependencies of target combined
[ 71%] Built target combined
Scanning dependencies of target ocean_stub.exe
[ 73%] Building Fortran object CMakeFiles/ocean_stub.exe.dir/ocean_stub/src/ocean.F90.o
[ 75%] Linking Fortran executable bin/ocean_stub.exe
[ 75%] Built target ocean_stub.exe
Scanning dependencies of target ice_stub.exe
[ 77%] Building Fortran object CMakeFiles/ice_stub.exe.dir/ice_stub/src/ice_grid.F90.o
[ 79%] Building Fortran object CMakeFiles/ice_stub.exe.dir/ice_stub/src/ice.F90.o
[ 81%] Linking Fortran executable bin/ice_stub.exe
[ 81%] Built target ice_stub.exe
Scanning dependencies of target yatm.exe
[ 83%] Building Fortran object CMakeFiles/yatm.exe.dir/atm/src/forcing.F90.o
[ 85%] Building Fortran object CMakeFiles/yatm.exe.dir/atm/src/ice_grid_proxy.F90.o
[ 87%] Building Fortran object CMakeFiles/yatm.exe.dir/atm/src/kdtree2_module.F90.o
[ 89%] Building Fortran object CMakeFiles/yatm.exe.dir/atm/src/kdrunoff_mod.F90.o
[ 91%] Building Fortran object CMakeFiles/yatm.exe.dir/atm/src/remap_runoff_mod.F90.o
[ 93%] Building Fortran object CMakeFiles/yatm.exe.dir/atm/src/runoff.F90.o
[ 95%] Building Fortran object CMakeFiles/yatm.exe.dir/atm/src/yatm_version.F90.o
[ 97%] Building Fortran object CMakeFiles/yatm.exe.dir/atm/src/atm.F90.o
[100%] Linking Fortran executable bin/yatm.exe
[100%] Built target yatm.exe
Compiling MOM5.1...
A list of the files you checked out is in the file /short/v45/pas561/access-om2/src/mom/exp/path_names ...
grep: ../src/shared/version/version.F90: No such file or directory
....................................................................................................................... Makefile is ready.
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c -I/short/v45/pas561/access-om2/src/mom/src/shared/include /short/v45/pas561/access-om2/src/mom/src/shared/mpp/mpp_parameter.F90
mpicc -Duse_netCDF -Duse_libMPI -DACCESS -D__IFC -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -O2 -debug minimal -no-vec -c /short/v45/pas561/access-om2/src/mom/src/shared/mpp/affinity.c
mpicc -Duse_netCDF -Duse_libMPI -DACCESS -D__IFC -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -O2 -debug minimal -no-vec -c -I/short/v45/pas561/access-om2/src/mom/src/shared/mosaic /short/v45/pas561/access-om2/src/mom/src/shared/mosaic/gradient_c2l.c
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c -I/short/v45/pas561/access-om2/src/mom/src/shared/include /short/v45/pas561/access-om2/src/mom/src/shared/platform/platform.F90
Using 8-byte addressing
Using PURE
Converting pointers to allocatable components
Using 8-byte addressing
Using PURE
Converting pointers to allocatable components
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c /short/v45/pas561/access-om2/src/mom/src/shared/constants/constants.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c -I/short/v45/pas561/access-om2/src/mom/src/shared/include /short/v45/pas561/access-om2/src/mom/src/shared/drifters/cloud_interpolator.F90
mpicc -Duse_netCDF -Duse_libMPI -DACCESS -D__IFC -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -O2 -debug minimal -no-vec -c -I/short/v45/pas561/access-om2/src/mom/src/shared/mosaic /short/v45/pas561/access-om2/src/mom/src/shared/mosaic/mosaic_util.c
Using 8-byte addressing
Using PURE
Converting pointers to allocatable components
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c /short/v45/pas561/access-om2/src/mom/src/shared/random_numbers/MersenneTwister.F90
mpicc -Duse_netCDF -Duse_libMPI -DACCESS -D__IFC -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -O2 -debug minimal -no-vec -c /short/v45/pas561/access-om2/src/mom/src/shared/memutils/memuse.c
mpicc -Duse_netCDF -Duse_libMPI -DACCESS -D__IFC -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -O2 -debug minimal -no-vec -c /short/v45/pas561/access-om2/src/mom/src/shared/mpp/threadloc.c
mpicc -Duse_netCDF -Duse_libMPI -DACCESS -D__IFC -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -O2 -debug minimal -no-vec -c -I/short/v45/pas561/access-om2/src/mom/src/shared/mosaic /short/v45/pas561/access-om2/src/mom/src/shared/mosaic/create_xgrid.c
mpicc -Duse_netCDF -Duse_libMPI -DACCESS -D__IFC -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -O2 -debug minimal -no-vec -c -I/short/v45/pas561/access-om2/src/mom/src/shared/mosaic /short/v45/pas561/access-om2/src/mom/src/shared/mosaic/interp.c
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c /short/v45/pas561/access-om2/src/mom/src/shared/drifters/quicksort.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c -I/short/v45/pas561/access-om2/src/mom/src/shared/include /short/v45/pas561/access-om2/src/mom/src/shared/drifters/drifters_core.F90
Using 8-byte addressing
Using PURE
Converting pointers to allocatable components
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c -I/short/v45/pas561/access-om2/src/mom/src/shared/include /short/v45/pas561/access-om2/src/mom/src/shared/drifters/drifters_input.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c /short/v45/pas561/access-om2/src/mom/src/shared/version/version.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c /short/v45/pas561/access-om2/src/mom/src/shared/test/dump_field.F90
Using 8-byte addressing
Using PURE
Converting pointers to allocatable components
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c /short/v45/pas561/access-om2/src/mom/src/shared/drifters/drifters_io.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c /short/v45/pas561/access-om2/src/mom/src/shared/tridiagonal/tridiagonal.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c /short/v45/pas561/access-om2/src/mom/src/shared/sat_vapor_pres/sat_vapor_pres_k.F90
mpicc -Duse_netCDF -Duse_libMPI -DACCESS -D__IFC -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -O2 -debug minimal -no-vec -c -I/short/v45/pas561/access-om2/src/mom/src/shared/mosaic /short/v45/pas561/access-om2/src/mom/src/shared/mosaic/read_mosaic.c
mpicc -Duse_netCDF -Duse_libMPI -DACCESS -D__IFC -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -O2 -debug minimal -no-vec -c /short/v45/pas561/access-om2/src/mom/src/shared/mpp/nsclock.c
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c -I/short/v45/pas561/access-om2/src/mom/src/shared/include -I/short/v45/pas561/access-om2/src/mom/src/shared/mpp/include /short/v45/pas561/access-om2/src/mom/src/shared/mpp/mpp_data.F90
Using 8-byte addressing
Using PURE
Converting pointers to allocatable components
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c -I/short/v45/pas561/access-om2/src/mom/src/shared/include -I/short/v45/pas561/access-om2/src/mom/src/shared/mpp/include /short/v45/pas561/access-om2/src/mom/src/shared/mpp/mpp.F90
Using 8-byte addressing
Using PURE
Converting pointers to allocatable components
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c -I/short/v45/pas561/access-om2/src/mom/src/shared/include /short/v45/pas561/access-om2/src/mom/src/shared/mpp/mpp_efp.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c /short/v45/pas561/access-om2/src/mom/src/shared/mpp/mpp_memutils.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c -I/short/v45/pas561/access-om2/src/mom/src/shared/include /short/v45/pas561/access-om2/src/mom/src/shared/mpp/mpp_pset.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c /short/v45/pas561/access-om2/src/mom/src/shared/horiz_interp/horiz_interp_type.F90
Using 8-byte addressing
Using PURE
Converting pointers to allocatable components
Using 8-byte addressing
Using PURE
Converting pointers to allocatable components
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c /short/v45/pas561/access-om2/src/mom/src/shared/mosaic/gradient.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c /short/v45/pas561/access-om2/src/mom/src/shared/mpp/mpp_utilities.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c /short/v45/pas561/access-om2/src/mom/src/shared/fft/fft99.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c -I/short/v45/pas561/access-om2/src/mom/src/shared/include /short/v45/pas561/access-om2/src/mom/src/shared/mpp/test_mpp_pset.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c -I/short/v45/pas561/access-om2/src/mom/src/shared/include -I/short/v45/pas561/access-om2/src/mom/src/shared/mpp/include /short/v45/pas561/access-om2/src/mom/src/shared/mpp/mpp_domains.F90
Using 8-byte addressing
Using PURE
Converting pointers to allocatable components
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c -I/short/v45/pas561/access-om2/src/mom/src/shared/include -I/short/v45/pas561/access-om2/src/mom/src/shared/mpp/include /short/v45/pas561/access-om2/src/mom/src/shared/mpp/mpp_io.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c -I/short/v45/pas561/access-om2/src/mom/src/shared/include -I/short/v45/pas561/access-om2/src/mom/src/shared/drifters /short/v45/pas561/access-om2/src/mom/src/shared/drifters/drifters_comm.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c -I/short/v45/pas561/access-om2/src/mom/src/shared/include /short/v45/pas561/access-om2/src/mom/src/shared/block_control/block_control.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c -I/short/v45/pas561/access-om2/src/mom/src/shared/include /short/v45/pas561/access-om2/src/mom/src/shared/mpp/test_mpp_domains.F90
Using 8-byte addressing
Using PURE
Converting pointers to allocatable components
Using 8-byte addressing
Using PURE
Converting pointers to allocatable components
Compiling in MPI mode (with or without MPP)
Using 8-byte addressing
Using PURE
Converting pointers to allocatable components
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c -I/short/v45/pas561/access-om2/src/mom/src/shared/include -I/short/v45/pas561/access-om2/src/mom/src/shared/drifters /short/v45/pas561/access-om2/src/mom/src/shared/drifters/drifters.F90
Using 8-byte addressing
Using PURE
Converting pointers to allocatable components
Compiling in MPI mode (with or without MPP)
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c -I/short/v45/pas561/access-om2/src/mom/src/shared/include -I/short/v45/pas561/access-om2/src/mom/src/shared/fms /short/v45/pas561/access-om2/src/mom/src/shared/fms/fms_io.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c /short/v45/pas561/access-om2/src/mom/src/shared/memutils/memutils.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c -I/short/v45/pas561/access-om2/src/mom/src/shared/include /short/v45/pas561/access-om2/src/mom/src/shared/mpp/test_mpp_io.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c -I/short/v45/pas561/access-om2/src/mom/src/shared/include /short/v45/pas561/access-om2/src/mom/src/shared/mpp/test_mpp.F90
Using 8-byte addressing
Using PURE
Converting pointers to allocatable components
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c /short/v45/pas561/access-om2/src/mom/src/shared/fms/fms.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c /short/v45/pas561/access-om2/src/mom/src/shared/mosaic/mosaic.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c -I/short/v45/pas561/access-om2/src/mom/src/shared/include /short/v45/pas561/access-om2/src/mom/src/shared/fms/test_fms_io.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c -I/short/v45/pas561/access-om2/src/mom/src/shared/include /short/v45/pas561/access-om2/src/mom/src/shared/time_manager/time_manager.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c /short/v45/pas561/access-om2/src/mom/src/shared/axis_utils/axis_utils.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c /short/v45/pas561/access-om2/src/mom/src/shared/horiz_interp/horiz_interp_conserve.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c /short/v45/pas561/access-om2/src/mom/src/shared/horiz_interp/horiz_interp_bilinear.F90
Using 8-byte addressing
Using PURE
Converting pointers to allocatable components
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c /short/v45/pas561/access-om2/src/mom/src/shared/horiz_interp/horiz_interp_bicubic.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c /short/v45/pas561/access-om2/src/mom/src/shared/horiz_interp/horiz_interp_spherical.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c -I/short/v45/pas561/access-om2/src/mom/src/shared/include /short/v45/pas561/access-om2/src/mom/src/shared/diag_manager/diag_grid.F90
Using 8-byte addressing
Using PURE
Converting pointers to allocatable components
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c -I/short/v45/pas561/access-om2/src/mom/src/shared/field_manager /short/v45/pas561/access-om2/src/mom/src/shared/field_manager/field_manager.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccessom2/build/include -fno-alias -safe-cray-ptr -fpe0 -ftz -assume byterecl -i4 -r8 -traceback -nowarn -check noarg_temp_created -assume nobuffered_io -convert big_endian -grecord-gcc-switches -align all -O2 -debug minimal -xHost -c /short/v45/pas561/access-om2/src/mom/src/shared/random_numbers/random_numbers.F90
mpifort -Duse_netCDF -Duse_libMPI -DACCESS -fpp -Wp,-w -I/apps/netcdf/4.2.1.1/include -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/psmile.MPI1 -I/short/v45/pas561/access-om2/src/libaccessom2/build/oasis3-mct-prefix/src/oasis3-mct/Linux/build/lib/mct -I/short/v45/pas561/access-om2/src/libaccesso
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I've just pushed an update that should fix it. |
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Yep. All good now.
Thanks
P
…On Tue, Jan 29, 2019 at 4:37 PM Andrew Kiss ***@***.***> wrote:
I've just pushed an update that should fix it.
@PaulSpence <https://github.com/PaulSpence> - do a git pull and try again.
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<#131 (comment)>,
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Paul Spence, PhD
Senior Lecturer, Climate Change Research Centre
University of New South Wales
Sydney, Australia
[email protected]
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Fixed with 81f6f1a |
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Hi,
I followed the compile quick start guide on the wiki page.
./install.sh failed with the following:
ls: cannot access /short/v45/pas561/access-om2/src/cice5/build_auscom_3600x2700_1392p/cice_auscom_3600x2700_1392p.exe: No such file or directory
Build failed!
Thanks
Paul
The text was updated successfully, but these errors were encountered: