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Update the ParallelIO, ESMF and XIOS modules on Juno #9

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merged 1 commit into from
Jul 27, 2023
+10 −11
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Update the ParallelIO, ESMF and XIOS modules on Juno #9

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4 changes: 2 additions & 2 deletions machines/cmake_macros/intel_juno.cmake
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Original file line number Diff line number Diff line change
@@ -1,8 +1,8 @@
set(AR "xiar")
set(ARFLAGS "cru")
if (MPILIB STREQUAL impi)
string(APPEND FFLAGS " -qmkl=cluster ")
string(APPEND CFLAGS " -qmkl=cluster ")
string(APPEND FFLAGS " -qmkl=cluster -march=icelake-client -mtune=icelake-client -qopt-zmm-usage=high -no-fma ")
string(APPEND CFLAGS " -qmkl=cluster -march=icelake-client -mtune=icelake-client -qopt-zmm-usage=high -no-fma ")
string(APPEND LDFLAGS " -L/juno/opt/spacks/0.20.0/opt/spack/linux-rhel8-icelake/intel-2021.6.0/xerces-c/3.2.3-witntw6kh77tp7mqhlrvpk2ezimigecm/lib/ -lxerces-c ")
string(APPEND SLIBS " -qmkl=cluster -lstdc++")
endif()
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17 changes: 8 additions & 9 deletions machines/config_machines.xml
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Original file line number Diff line number Diff line change
Expand Up @@ -2257,7 +2257,7 @@ This allows using a different mpirun command to launch unit tests
<PROJECT_REQUIRED>TRUE</PROJECT_REQUIRED>
<mpirun mpilib="default">
<!-- <executable> mpirun </executable> -->
<executable> mpiexec.hydra </executable>
<executable> mpiexec.hydra </executable>
</mpirun>
<module_system type="module">
<init_path lang="perl">/juno/opt/module-environment/5.2.0/init/perl.pm</init_path>
Expand Down Expand Up @@ -2315,31 +2315,30 @@ This allows using a different mpirun command to launch unit tests
<command name="load">intel-2021.6.0/lzo/2.10-o5rf7</command>
<command name="load">intel-2021.6.0/boost/1.80.0-paock</command>
<command name="load">intel-2021.6.0/mbedtls/2.28.0-g3uom</command>
<command name="load">intel-2021.6.0/impi-2021.6.0/xios/2.5-ltc25</command>
<command name="load">intel-2021.6.0/impi-2021.6.0/xios/2.5-36kwn</command>
<command name="load">intel-2021.6.0/libarchive/3.5.2-5bbgw</command>
<command name="load">intel-2021.6.0/impi-2021.6.0/parallelio/2.5.9-yg3hi</command>
<command name="load">intel-2021.6.0/impi-2021.6.0/parallelio/2.6.0-tc4q3</command>
<command name="load">intel-2021.6.0/libuv/1.44.1-v7e5k</command>
</modules>
<modules compiler="intel" DEBUG="TRUE">
<command name="load">intel-2021.6.0/impi-2021.6.0/esmf-dbg/8.4.1-llmff</command>
<command name="load">intel-2021.6.0/impi-2021.6.0/esmf-dbg/8.4.2-pioext_2.6.0-o5yu4</command>
</modules>
<modules compiler="intel" DEBUG="FALSE">
<command name="load">intel-2021.6.0/impi-2021.6.0/esmf/8.4.1-ouoeb</command>
<command name="load">intel-2021.6.0/impi-2021.6.0/esmf/8.4.2-pioext_2.6.0-dnjmu</command>
</modules>
</module_system>
<environment_variables>
<env name="XIOS_PATH">/juno/opt/spacks/0.20.0/opt/spack/linux-rhel8-icelake/intel-2021.6.0/xios/2.5-ltc25rohqws6elzxkwslgjw4jsu5qahy</env>
<env name="XIOS_PATH">/juno/opt/spacks/0.20.0/opt/spack/linux-rhel8-icelake/intel-2021.6.0/xios/2.5-36kwnuq7kykbrljrnubnwenyvyzbbmz5</env>
</environment_variables>
<environment_variables comp_interface="nuopc">
<env name="ESMF_RUNTIME_PROFILE">ON</env>
<env name="ESMF_RUNTIME_PROFILE_OUTPUT">SUMMARY</env>
<env name="PIO_INCDIR">/juno/opt/spacks/0.20.0/opt/spack/linux-rhel8-icelake/intel-2021.6.0/intel-oneapi-mpi-2021.6.0/parallelio/2.5.9-yg3hicmfi7y76meiuzhboxrappkwoxfl/include</env>
<env name="PIO_LIBDIR">/juno/opt/spacks/0.20.0/opt/spack/linux-rhel8-icelake/intel-2021.6.0/intel-oneapi-mpi-2021.6.0/parallelio/2.5.9-yg3hicmfi7y76meiuzhboxrappkwoxfl/lib</env>
<env name="PIO_INCDIR">/juno/opt/spacks/0.20.0/opt/spack/linux-rhel8-icelake/intel-2021.6.0/intel-oneapi-mpi-2021.6.0/parallelio/2.6.0-tc4q35xniwdvqw4pihkv3fr5j2q5yl7u/include</env>
<env name="PIO_LIBDIR">/juno/opt/spacks/0.20.0/opt/spack/linux-rhel8-icelake/intel-2021.6.0/intel-oneapi-mpi-2021.6.0/parallelio/2.6.0-tc4q35xniwdvqw4pihkv3fr5j2q5yl7u/lib</env>
</environment_variables>
<environment_variables compiler="intel">
<env name="I_MPI_HYDRA_BOOTSTRAP">lsf</env>
<env name="I_MPI_HYDRA_IFACE">ib0</env>
<!-- <env name="I_MPI_FABRICS">ofi</env> -->
<env name="I_MPI_HYDRA_BRANCH_COUNT">{{ num_nodes }}</env>
</environment_variables>
</machine>
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