Update version to Icepack 1.3.3 (#419)

Update interface documentation Remove trailing blanks in source code
CICE-Consortium · Dec 7, 2022 · 8f96707 · 8f96707
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commit 8f96707
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diff --git a/columnphysics/icepack_itd.F90 b/columnphysics/icepack_itd.F90
@@ -1309,9 +1309,9 @@ subroutine zap_small_areas (dt,        ntrcr,        &
       !-----------------------------------------------------------------
 
             xtmp = (rhoi*vicen(n) + rhos*vsnon(n)) &
-                 * (aice-c1)/aice / dt 
-            dfresh = dfresh + xtmp 
- 
+                 * (aice-c1)/aice / dt
+            dfresh = dfresh + xtmp
+
             if (saltflux_option == 'prognostic') then
                sicen = c0
                do k=1,nilyr
@@ -1323,8 +1323,8 @@ subroutine zap_small_areas (dt,        ntrcr,        &
                xtmp = rhoi*vicen(n)*ice_ref_salinity*p001 &
                     * (aice-c1)/aice / dt
             endif
-            dfsalt = dfsalt + xtmp 
- 
+            dfsalt = dfsalt + xtmp
+
             if (solve_zsal) then
             do k = 1,nblyr
                xtmp = rhosi*trcrn(nt_fbri,n)*vicen(n)*p001&

diff --git a/columnphysics/icepack_parameters.F90 b/columnphysics/icepack_parameters.F90
@@ -563,7 +563,7 @@ subroutine icepack_init_parameters(   &
          dSdt_slow_mode_in    , & ! slow mode drainage strength (m s-1 K-1)
          phi_c_slow_mode_in   , & ! liquid fraction porosity cutoff for slow mode
          phi_i_mushy_in           ! liquid fraction of congelation ice
-        
+
       character(len=*), intent(in), optional :: &
          tfrz_option_in              ! form of ocean freezing temperature
                                      ! 'minus1p8' = -1.8 C

diff --git a/columnphysics/icepack_therm_itd.F90 b/columnphysics/icepack_therm_itd.F90
@@ -1605,7 +1605,7 @@ subroutine add_new_ice (ncat,      nilyr,      &
       !-----------------------------------------------------------------
 
       if (update_ocn_f) then
-         dfresh = -rhoi*vi0new/dt 
+         dfresh = -rhoi*vi0new/dt
          if (saltflux_option == 'prognostic') then
             dfsalt = Si0new*p001*dfresh
          else

diff --git a/columnphysics/icepack_therm_vertical.F90 b/columnphysics/icepack_therm_vertical.F90
@@ -453,7 +453,7 @@ subroutine thermo_vertical (nilyr,       nslyr,     &
       else
          fsaltn = fsaltn - rhoi*dhi*ice_ref_salinity*p001/dt
       endif
-      fhocnn = fhocnn + fadvocn ! for ktherm=2 
+      fhocnn = fhocnn + fadvocn ! for ktherm=2
 
       if (hin == c0) then
          if (tr_pond_topo) fpond = fpond - aicen * apond * hpond

diff --git a/columnphysics/version.txt b/columnphysics/version.txt
@@ -1 +1 @@
-ICEPACK 1.3.2
+ICEPACK 1.3.3
diff --git a/configuration/driver/icedrv_InitMod.F90 b/configuration/driver/icedrv_InitMod.F90
@@ -44,7 +44,7 @@ subroutine icedrv_initialize
       use icedrv_flux, only: init_coupler_flux, init_history_therm, &
           init_flux_atm_ocn
       use icedrv_forcing, only: init_forcing, get_forcing, get_wave_spec
-      use icedrv_forcing_bgc, only: get_forcing_bgc, faero_default, fiso_default, init_forcing_bgc 
+      use icedrv_forcing_bgc, only: get_forcing_bgc, faero_default, fiso_default, init_forcing_bgc
       use icedrv_restart_shared, only: restart
       use icedrv_init, only: input_data, init_state, init_grid2, init_fsd
       use icedrv_init_column, only: init_thermo_vertical, init_shortwave, init_zbgc
@@ -138,7 +138,7 @@ subroutine icedrv_initialize
       if (icepack_warnings_aborted()) call icedrv_system_abort(string=subname, &
           file=__FILE__,line= __LINE__)
 
-      call init_forcing      ! initialize forcing (standalone)     
+      call init_forcing      ! initialize forcing (standalone)
       if (skl_bgc .or. z_tracers) call init_forcing_bgc !cn
       if (tr_fsd .and. wave_spec) call get_wave_spec ! wave spectrum in ice
       call get_forcing(istep1)       ! get forcing from data arrays

diff --git a/configuration/driver/icedrv_MAIN.F90 b/configuration/driver/icedrv_MAIN.F90
@@ -1,24 +1,24 @@
 !=======================================================================
 ! Copyright (c) 2022, Triad National Security, LLC
 ! All rights reserved.
-!                
+!
 ! Copyright 2022. Triad National Security, LLC. This software was
-! produced under U.S. Government contract DE-AC52-06NA25396 for Los 
+! produced under U.S. Government contract DE-AC52-06NA25396 for Los
 ! Alamos National Laboratory (LANL), which is operated by Triad
-! National Security, LLC for the U.S. Department of Energy. The U.S.  
-! Government has rights to use, reproduce, and distribute this software.  
-! NEITHER THE GOVERNMENT NOR TRIAD NATIONAL SECURITY, LLC MAKES ANY  
+! National Security, LLC for the U.S. Department of Energy. The U.S.
+! Government has rights to use, reproduce, and distribute this software.
+! NEITHER THE GOVERNMENT NOR TRIAD NATIONAL SECURITY, LLC MAKES ANY
 ! WARRANTY, EXPRESS OR IMPLIED, OR ASSUMES ANY LIABILITY FOR THE USE OF
-! THIS SOFTWARE. If software is modified to produce derivative works, 
-! such modified software should be clearly marked, so as not to confuse 
+! THIS SOFTWARE. If software is modified to produce derivative works,
+! such modified software should be clearly marked, so as not to confuse
 ! it with the version available from LANL.
 !
 ! The full license and distribution policy are available from
 ! https://github.com/CICE-Consortium
-! 
+!
 !=======================================================================
 
-! Main driver routine for Icepack, the column package for CICE.  
+! Main driver routine for Icepack, the column package for CICE.
 ! Initializes and steps through the model.
 !
 ! author Elizabeth C. Hunke, LANL

diff --git a/configuration/driver/icedrv_RunMod.F90 b/configuration/driver/icedrv_RunMod.F90
@@ -127,7 +127,7 @@ subroutine ice_step
       !-----------------------------------------------------------------
 
       call icepack_query_parameters(skl_bgc_out=skl_bgc, z_tracers_out=z_tracers)
-      call icepack_query_parameters(solve_zsal_out=solve_zsal, & 
+      call icepack_query_parameters(solve_zsal_out=solve_zsal, &
                                     calc_Tsfc_out=calc_Tsfc, &
                                     wave_spec_out=wave_spec)
       call icepack_query_tracer_flags(tr_brine_out=tr_brine,tr_fsd_out=tr_fsd, &
@@ -147,7 +147,7 @@ subroutine ice_step
       !-----------------------------------------------------------------
       ! Scale radiation fields
       !-----------------------------------------------------------------
-      
+
       if (calc_Tsfc) call prep_radiation ()
 
 !      call icedrv_diagnostics_debug ('post prep_radiation')
@@ -169,26 +169,26 @@ subroutine ice_step
       !-----------------------------------------------------------------
       ! dynamics, transport, ridging
       !-----------------------------------------------------------------
-      
+
       call init_history_dyn
-      
+
       ! wave fracture of the floe size distribution
       ! note this is called outside of the dynamics subcycling loop
       if (tr_fsd .and. wave_spec) call step_dyn_wave(dt)
 
       do k = 1, ndtd
-        
+
         ! ridging
         call step_dyn_ridge (dt_dyn, ndtd)
-        
+
         ! clean up, update tendency diagnostics
         offset = c0
         call update_state (dt_dyn, daidtd, dvidtd, dagedtd, offset)
-        
+
       enddo
 
 !      call icedrv_diagnostics_debug ('post dynamics')
-      
+
       !-----------------------------------------------------------------
       ! snow redistribution and metamorphosis
       !-----------------------------------------------------------------
@@ -203,21 +203,21 @@ subroutine ice_step
       !-----------------------------------------------------------------
       ! albedo, shortwave radiation
       !-----------------------------------------------------------------
-      
+
       call step_radiation (dt)
 
       !-----------------------------------------------------------------
       ! get ready for coupling and the next time step
       !-----------------------------------------------------------------
-      
+
       call coupling_prep
 
 !      call icedrv_diagnostics_debug ('post step_rad, cpl')
 
       !-----------------------------------------------------------------
       ! write data
       !-----------------------------------------------------------------
-      
+
       if (mod(istep,diagfreq) == 0) then
          call runtime_diags(dt)       ! log file
          if (solve_zsal)              call zsal_diags
@@ -228,16 +228,16 @@ subroutine ice_step
       if (history_cdf) then
          call history_write()
       endif
-      
+
       if (write_restart == 1) then
          call dumpfile     ! core variables for restarting
          if (solve_zsal .or. skl_bgc .or. z_tracers) &
             call write_restart_bgc         ! biogeochemistry
          call final_restart
       endif
-      
+
     end subroutine ice_step
-    
+
 !=======================================================================
 !
 ! Prepare for coupling
@@ -264,7 +264,7 @@ subroutine coupling_prep
 
       ! local variables
 
-      integer (kind=int_kind) :: & 
+      integer (kind=int_kind) :: &
          n           , & ! thickness category index
          i           , & ! horizontal index
          k           , & ! tracer index
@@ -314,7 +314,7 @@ subroutine coupling_prep
          do n = 1, ncat
          do i = 1, nx
             if (aicen(i,n) > puny) then
-                  
+
             alvdf(i) = alvdf(i) + alvdfn(i,n)*aicen(i,n)
             alidf(i) = alidf(i) + alidfn(i,n)*aicen(i,n)
             alvdr(i) = alvdr(i) + alvdrn(i,n)*aicen(i,n)
@@ -329,7 +329,7 @@ subroutine coupling_prep
 
             apeff_ai(i) = apeff_ai(i) + apeffn(i,n)*aicen(i,n) ! for history
             snowfrac(i) = snowfrac(i) + snowfracn(i,n)*aicen(i,n) ! for history
-               
+
             endif ! aicen > puny
          enddo
          enddo
@@ -357,8 +357,8 @@ subroutine coupling_prep
             fsalt_ai  (i) = fsalt  (i)
             fhocn_ai  (i) = fhocn  (i)
             fswthru_ai(i) = fswthru(i)
-            fzsal_ai  (i) = fzsal  (i) 
-            fzsal_g_ai(i) = fzsal_g(i)  
+            fzsal_ai  (i) = fzsal  (i)
+            fzsal_g_ai(i) = fzsal_g(i)
 
             if (nbtrcr > 0) then
             do k = 1, nbtrcr

diff --git a/configuration/driver/icedrv_arrays_column.F90 b/configuration/driver/icedrv_arrays_column.F90
@@ -123,12 +123,12 @@ module icedrv_arrays_column
       ! aerosol optical properties   -> band  |
       !                                       v aerosol
       ! for combined dust category, use category 4 properties
-      real (kind=dbl_kind), dimension(icepack_nspint,icepack_max_aero), public :: & 
+      real (kind=dbl_kind), dimension(icepack_nspint,icepack_max_aero), public :: &
          kaer_tab   , & ! aerosol mass extinction cross section (m2/kg)
          waer_tab   , & ! aerosol single scatter albedo (fraction)
          gaer_tab       ! aerosol asymmetry parameter (cos(theta))
 
-      real (kind=dbl_kind), dimension(icepack_nspint,icepack_nmodal1), public :: & 
+      real (kind=dbl_kind), dimension(icepack_nspint,icepack_nmodal1), public :: &
          kaer_bc_tab, & ! BC mass extinction cross section (m2/kg)
          waer_bc_tab, & ! BC single scatter albedo (fraction)
          gaer_bc_tab    ! BC aerosol asymmetry parameter (cos(theta))
@@ -144,7 +144,7 @@ module icedrv_arrays_column
 
       real (kind=dbl_kind), dimension (nblyr+1), public :: &
          igrid          ! biology vertical interface points
- 
+
       real (kind=dbl_kind), dimension (nilyr+1), public :: &
          cgrid     , &  ! CICE vertical coordinate
          icgrid    , &  ! interface grid for CICE (shortwave variable)
@@ -197,12 +197,12 @@ module icedrv_arrays_column
       integer (kind=int_kind), dimension(nx,icepack_max_algae), public :: &
          algal_peak     ! vertical location of algal maximum, 0 if no maximum
 
-      real (kind=dbl_kind), & 
+      real (kind=dbl_kind), &
          dimension (nx,nblyr+1,ncat), public :: &
          Zoo            ! N losses accumulated in timestep (ie. zooplankton/bacteria)
                         ! (mmol/m^3)
 
-      real (kind=dbl_kind), &  
+      real (kind=dbl_kind), &
          dimension (nx,ncat), public :: &
          dhbr_top   , & ! brine top change
          dhbr_bot       ! brine bottom change
@@ -228,18 +228,18 @@ module icedrv_arrays_column
          NO_net         ! Total nitrate per grid cell
 
       logical (kind=log_kind), dimension (nx), public :: &
-         Rayleigh_criteria    ! .true. means Ra_c was reached   
+         Rayleigh_criteria    ! .true. means Ra_c was reached
 
       real (kind=dbl_kind), dimension (nx), public :: &
          Rayleigh_real        ! .true. = c1, .false. = c0
 
-      real (kind=dbl_kind), & 
+      real (kind=dbl_kind), &
          dimension (nx,ncat), public :: &
          sice_rho       ! avg sea ice density  (kg/m^3)  ! ech: diagnostic only?
 
-      real (kind=dbl_kind), & 
+      real (kind=dbl_kind), &
          dimension (nx,ncat), public :: &
-         fzsaln     , & ! category fzsal(kg/m^2/s) 
+         fzsaln     , & ! category fzsal(kg/m^2/s)
          fzsaln_g       ! salt flux from gravity drainage only
 
       real (kind=dbl_kind), dimension (nx), public :: &
@@ -256,7 +256,7 @@ module icedrv_arrays_column
       real (kind=dbl_kind), dimension (nx), public :: &
          upNO       , & ! nitrate uptake rate (mmol/m^2/d) times aice
          upNH           ! ammonium uptake rate (mmol/m^2/d) times aice
-        
+
       real (kind=dbl_kind), &
          dimension(nx,max_ntrcr,ncat), public :: &
          trcrn_sw       ! bgc tracers active in the delta-Eddington shortwave
@@ -283,7 +283,7 @@ module icedrv_arrays_column
       real (kind=dbl_kind), dimension (nx,nfreq), public :: &
          wave_spectrum     ! wave spectrum
 
-      real (kind=dbl_kind), dimension (nx,nfsd), public :: & 
+      real (kind=dbl_kind), dimension (nx,nfsd), public :: &
          ! change in floe size distribution due to processes
          d_afsd_newi, d_afsd_latg, d_afsd_latm, d_afsd_wave, d_afsd_weld