numexpress fails

[doutriaux1]

On hopper Numexpr fails, because it seems to be failing to find lapack:

Running numexpr-1.4.2/setup.py -q bdist_egg --dist-dir
/tmp/cdoutri/easy_install-gXasmu/numexpr-1.4.2/egg-dist-tmp-uiGt5c

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From /global/homes/c/cdoutri/repos/builder/Numexpr-prefix/src/Numexpr-stamp/Numexpr-install-err.log

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Traceback (most recent call last):

File "/global/homes/c/cdoutri/uvcdat/2012-12-17/bin/easy_install", line 8, in <module>
  load_entry_point('setuptools==0.6c11', 'console_scripts', 'easy_install')()
File "build/bdist.linux-x86_64/egg/setuptools/command/easy_install.py", line 1712, in main
File "build/bdist.linux-x86_64/egg/setuptools/command/easy_install.py", line 1700, in with_ei_usage
File "build/bdist.linux-x86_64/egg/setuptools/command/easy_install.py", line 1716, in <lambda>
File "/global/homes/c/cdoutri/uvcdat/2012-12-17/lib/python2.7/distutils/core.py", line 152, in setup
  dist.run_commands()
File "/global/homes/c/cdoutri/uvcdat/2012-12-17/lib/python2.7/distutils/dist.py", line 953, in run_commands
  self.run_command(cmd)
File "/global/homes/c/cdoutri/uvcdat/2012-12-17/lib/python2.7/distutils/dist.py", line 972, in run_command
  cmd_obj.run()
File "build/bdist.linux-x86_64/egg/setuptools/command/easy_install.py", line 211, in run
File "build/bdist.linux-x86_64/egg/setuptools/command/easy_install.py", line 446, in easy_install
File "build/bdist.linux-x86_64/egg/setuptools/command/easy_install.py", line 476, in install_item
File "build/bdist.linux-x86_64/egg/setuptools/command/easy_install.py", line 655, in install_eggs
File "build/bdist.linux-x86_64/egg/setuptools/command/easy_install.py", line 930, in build_and_install
File "build/bdist.linux-x86_64/egg/setuptools/command/easy_install.py", line 919, in run_setup
File "build/bdist.linux-x86_64/egg/setuptools/sandbox.py", line 62, in run_setup
File "build/bdist.linux-x86_64/egg/setuptools/sandbox.py", line 105, in run
File "build/bdist.linux-x86_64/egg/setuptools/sandbox.py", line 64, in <lambda>
File "setup.py", line 6, in <module>
File "/global/homes/c/cdoutri/uvcdat/2012-12-17/lib/python2.7/site-packages/numpy/__init__.py", line 136, in <module>
  import add_newdocs
File "/global/homes/c/cdoutri/uvcdat/2012-12-17/lib/python2.7/site-packages/numpy/add_newdocs.py", line 9, in <module>
  from numpy.lib import add_newdoc
File "/global/homes/c/cdoutri/uvcdat/2012-12-17/lib/python2.7/site-packages/numpy/lib/__init__.py", line 13, in <module>
  from polynomial import *
File "/global/homes/c/cdoutri/uvcdat/2012-12-17/lib/python2.7/site-packages/numpy/lib/polynomial.py", line 17, in <module>
  from numpy.linalg import eigvals, lstsq
File "/global/homes/c/cdoutri/uvcdat/2012-12-17/lib/python2.7/site-packages/numpy/linalg/__init__.py", line 48, in <module>
  from linalg import *
File "/global/homes/c/cdoutri/uvcdat/2012-12-17/lib/python2.7/site-packages/numpy/linalg/linalg.py", line 23, in <module>
  from numpy.linalg import lapack_lite

ImportError: liblapack.so: cannot open shared object file: No such file or
directory

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[aashish24]

Charles,

What you suggest for fix this? I believe its all easy_install right? Not sure if I am the right person to fix this but could if point in the right direction.

Thanks

[doutriaux1]

It used to work though. It's broken since improv_build.

I think it's a PATH issue again. I'm trying to fix it on that machine, will let you know if I find a bug fix.

C.

From: aashish <[email protected]mailto:[email protected]>
Reply-To: UV-CDAT/uvcdat <[email protected]mailto:[email protected]>
Date: Monday, December 17, 2012 1:06 PM
To: UV-CDAT/uvcdat <[email protected]mailto:[email protected]>
Cc: "Doutriaux, Charles" <[email protected]mailto:[email protected]>
Subject: Re: [uvcdat] numexpress fails (#78)

Charles,

What you suggest for fix this? I believe its all easy_install right? Not sure if I am the right person to fix this but could if point in the right direction.

Thanks

—
Reply to this email directly or view it on GitHubhttps://github.com//issues/78#issuecomment-11461443.

[doutriaux1]

fixed on hopper