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Fix FDB related tests #920

Merged
merged 9 commits into from
Feb 27, 2024
Merged

Fix FDB related tests #920

merged 9 commits into from
Feb 27, 2024

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victoria-cherkas
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@victoria-cherkas victoria-cherkas changed the base branch from main to dev_v0.21.1 February 27, 2024 14:30
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github-actions bot commented Feb 27, 2024

PR Preview Action v1.4.7
Preview removed because the pull request was closed.
2024-02-27 22:40 UTC

@victoria-cherkas
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launch jenkins flexpart-ifs fdb-fortran

@jenkins-apn
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tsa

🟢 unit test
Test
🟢summary
🟢 integration test
Test
🟢fdb-fortran-spack_info
🟢fdb-fortran-spack_spec
🟢flexpart-ifs-spack_info
🟢flexpart-ifs-spack_spec
🔴 system test
Test
🔴FdbFortran-install
🟢FlexpartIfs-install_10_4_4
🔴FlexpartIfs-install_fdb

WARNING: Serial tests did not run for system tests

@jenkins-apn
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balfrin

🟢 unit test
Test
🟢summary
🟢 integration test
Test
🟢fdb-fortran-spack_info
🟢fdb-fortran-spack_spec
🟢flexpart-ifs-spack_info
🟢flexpart-ifs-spack_spec
🔴 system test
Test
🔴FdbFortran-install
🟢FlexpartIfs-install_10_4_4
🔴FlexpartIfs-install_fdb

WARNING: Serial tests did not run for system tests

@jenkins-apn
Copy link

daint

🟢 unit test
Test
🟢summary
🟢 integration test
Test
🟢fdb-fortran-spack_info
🟢fdb-fortran-spack_spec
🟢flexpart-ifs-spack_info
🟢flexpart-ifs-spack_spec
🔴 system test
Test
🔴FdbFortran-install
🟢FlexpartIfs-install_10_4_4
🔴FlexpartIfs-install_fdb

WARNING: Serial tests did not run for system tests

@victoria-cherkas
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launch jenkins flexpart-ifs fdb-fortran

@jenkins-apn
Copy link

balfrin

🟢 unit test
Test
🟢summary
🟢 integration test
Test
🟢fdb-fortran-spack_info
🟢fdb-fortran-spack_spec
🟢flexpart-ifs-spack_info
🟢flexpart-ifs-spack_spec
🔴 system test
Test
🟢FdbFortran-install
🟢FlexpartIfs-install_10_4_4
🔴FlexpartIfs-install_fdb

WARNING: Serial tests did not run for system tests

@jenkins-apn
Copy link

tsa

🟢 unit test
Test
🟢summary
🟢 integration test
Test
🟢fdb-fortran-spack_info
🟢fdb-fortran-spack_spec
🟢flexpart-ifs-spack_info
🟢flexpart-ifs-spack_spec
🔴 system test
Test
🟢FdbFortran-install
🟢FlexpartIfs-install_10_4_4
🔴FlexpartIfs-install_fdb

WARNING: Serial tests did not run for system tests

@jenkins-apn
Copy link

daint

🟢 unit test
Test
🟢summary
🟢 integration test
Test
🟢fdb-fortran-spack_info
🟢fdb-fortran-spack_spec
🟢flexpart-ifs-spack_info
🟢flexpart-ifs-spack_spec
🔴 system test
Test
🟢FdbFortran-install
🟢FlexpartIfs-install_10_4_4
🔴FlexpartIfs-install_fdb

WARNING: Serial tests did not run for system tests

@victoria-cherkas
Copy link
Contributor Author

launch jenkins flexpart-ifs fdb-fortran

@jenkins-apn
Copy link

balfrin

🟢 unit test
Test
🟢summary
🟢 integration test
Test
🟢fdb-fortran-spack_info
🟢fdb-fortran-spack_spec
🟢flexpart-ifs-spack_info
🟢flexpart-ifs-spack_spec
🟢 system test
Test
🟢FdbFortran-install
🟢FlexpartIfs-install_10_4_4
🟢FlexpartIfs-install_fdb

@jenkins-apn
Copy link

tsa

🟢 unit test
Test
🟢summary
🟢 integration test
Test
🟢fdb-fortran-spack_info
🟢fdb-fortran-spack_spec
🟢flexpart-ifs-spack_info
🟢flexpart-ifs-spack_spec
🟢 system test
Test
🟢FdbFortran-install
🟢FlexpartIfs-install_10_4_4
🟢FlexpartIfs-install_fdb

@victoria-cherkas victoria-cherkas changed the title Fix metkit tests Fix FDB related tests Feb 27, 2024
@jenkins-apn
Copy link

daint

🟢 unit test
Test
🟢summary
🟢 integration test
Test
🟢fdb-fortran-spack_info
🟢fdb-fortran-spack_spec
🟢flexpart-ifs-spack_info
🟢flexpart-ifs-spack_spec
🟢 system test
Test
🟢FdbFortran-install
🟢FlexpartIfs-install_10_4_4
🟢FlexpartIfs-install_fdb

@jonasjucker
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Thanks for the fix 🤗

@jonasjucker jonasjucker merged commit d9c9a9e into dev_v0.21.1 Feb 27, 2024
3 checks passed
@jonasjucker jonasjucker deleted the dev_v0.21.1_metkit branch February 27, 2024 22:39
@dominichofer
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Please add tests for fdb and metkit.

jonasjucker added a commit that referenced this pull request Jun 20, 2024
* inital update

* remove blas variant, remove serialbox

* remove old extensions

* Delete sysconfigs/tsa/modules.yaml

* do not use upstreams

* py-toolz available in upstream spack

* GitHub Action: Apply Pep8-formatting

* remove upstreams

* add version 0.12.3

* cython@2 for [email protected]

* GitHub Action: Apply Pep8-formatting

* inherit from upstream, introduce v 2.4.0

* GitHub Action: Apply Pep8-formatting

* lock pip to :23.0 for py-cmake

* lock eckit-version for infero

* temporary deactivate testsuite for int2lm

* Revert "temporary deactivate testsuite for int2lm"

This reverts commit 2834f46.

* remove gmake on Daint

* remove deprecated config

* add gmake again

* Remove faulty classification as "spack locking problem"

* [python] no default ssl package

* [fdb] Remove package and tests

* [fckit] Remove package and tests

* [numpy] Remove package and tests.

* Revert "[fckit] Remove package and tests"

This reverts commit fe41fc2.

* Fix FDB related tests (#920)

* test:fix(pytorch-fortran): try explicit dependency on (c/g)make%gcc

* upd: point to icon-c2sm branch spack_v0.21.1

* Update system_test.py

* GitHub Action: Apply Pep8-formatting

* upd: cosmo spack env

* skip failing tests

* GitHub Action: Apply Pep8-formatting

* add link to latest spack version

* downgrade icon4py,gt4py mostly to build-tests, add fdb again

* GitHub Action: Apply Pep8-formatting

* add upstreams for Daint

* add upstream to config

* adapt unit-test

* Use single-thread make for flexpart-cosmo

* Update system_test.py

* Fixes to gt4py in v0.21.1 (#937)

* locking typing extensions version

* Update system_test.py

* Update system_test.py

* Update system_test.py

* GitHub Action: Apply Pep8-formatting

---------

Co-authored-by: Abishek Gopal <[email protected]>
Co-authored-by: github-actions <[email protected]>

* Update system_test.py (#938)

* drop test for nvhpc-cpu ICON

* cleanup

* [py-gt4py] fixes to typing-extensions versions (#939)

* fixes to typing-extensions versions

* GitHub Action: Apply Pep8-formatting

* Adding typing-extensions v4.10.0

* fixing typo in versions

---------

Co-authored-by: github-actions <[email protected]>

* remove irrelevant test

* [cdo] Remove conflict

* add patched xpmem, libxml%gcc to nudge concretizer

* GitHub Action: Apply Pep8-formatting

* fix typo

* deactivate failing test

* Revert "add patched xpmem, libxml%gcc to nudge concretizer"

This reverts commit 1d7a27a.

* GitHub Action: Apply Pep8-formatting

* Add workarounds for concretizer (#961)

---------

Co-authored-by: Jonas Jucker <[email protected]>
Co-authored-by: Dominic Hofer <[email protected]>
Co-authored-by: github-actions <[email protected]>
Co-authored-by: Victoria Cherkas <[email protected]>
Co-authored-by: Matthieu <[email protected]>
Co-authored-by: Michael Jähn <[email protected]>
Co-authored-by: abishekg7 <[email protected]>
Co-authored-by: Abishek Gopal <[email protected]>
Co-authored-by: Dominic Hofer <[email protected]>
jonasjucker added a commit that referenced this pull request Jun 25, 2024
* inital update

* remove blas variant, remove serialbox

* remove old extensions

* Delete sysconfigs/tsa/modules.yaml

* do not use upstreams

* py-toolz available in upstream spack

* GitHub Action: Apply Pep8-formatting

* remove upstreams

* add version 0.12.3

* cython@2 for [email protected]

* GitHub Action: Apply Pep8-formatting

* inherit from upstream, introduce v 2.4.0

* GitHub Action: Apply Pep8-formatting

* lock pip to :23.0 for py-cmake

* lock eckit-version for infero

* temporary deactivate testsuite for int2lm

* Revert "temporary deactivate testsuite for int2lm"

This reverts commit 2834f46.

* remove gmake on Daint

* remove deprecated config

* add gmake again

* Remove faulty classification as "spack locking problem"

* [python] no default ssl package

* [fdb] Remove package and tests

* [fckit] Remove package and tests

* [numpy] Remove package and tests.

* Revert "[fckit] Remove package and tests"

This reverts commit fe41fc2.

* Fix FDB related tests (#920)

* test:fix(pytorch-fortran): try explicit dependency on (c/g)make%gcc

* upd: point to icon-c2sm branch spack_v0.21.1

* Update system_test.py

* GitHub Action: Apply Pep8-formatting

* upd: cosmo spack env

* skip failing tests

* GitHub Action: Apply Pep8-formatting

* add link to latest spack version

* downgrade icon4py,gt4py mostly to build-tests, add fdb again

* GitHub Action: Apply Pep8-formatting

* add upstreams for Daint

* add upstream to config

* adapt unit-test

* Use single-thread make for flexpart-cosmo

* Update system_test.py

* Fixes to gt4py in v0.21.1 (#937)

* locking typing extensions version

* Update system_test.py

* Update system_test.py

* Update system_test.py

* GitHub Action: Apply Pep8-formatting

---------

Co-authored-by: Abishek Gopal <[email protected]>
Co-authored-by: github-actions <[email protected]>

* Update system_test.py (#938)

* drop test for nvhpc-cpu ICON

* cleanup

* [py-gt4py] fixes to typing-extensions versions (#939)

* fixes to typing-extensions versions

* GitHub Action: Apply Pep8-formatting

* Adding typing-extensions v4.10.0

* fixing typo in versions

---------

Co-authored-by: github-actions <[email protected]>

* remove irrelevant test

* [cdo] Remove conflict

* use upstream from Euler

* allow host mismatch

* add patch for boz-literals

* remove unused import that causes trouble on Euler

* replace copy_tree with install_tree

* add compiler again

* add gcc 8.5.0 for COSMO

* remove patch

* fix cosmo package

---------

Co-authored-by: Jonas Jucker <[email protected]>
Co-authored-by: Dominic Hofer <[email protected]>
Co-authored-by: github-actions <[email protected]>
Co-authored-by: Victoria Cherkas <[email protected]>
Co-authored-by: Matthieu <[email protected]>
Co-authored-by: Michael Jähn <[email protected]>
Co-authored-by: abishekg7 <[email protected]>
Co-authored-by: Abishek Gopal <[email protected]>
Co-authored-by: Dominic Hofer <[email protected]>
jonasjucker added a commit that referenced this pull request Jun 26, 2024
* inital update

* remove blas variant, remove serialbox

* remove old extensions

* Delete sysconfigs/tsa/modules.yaml

* do not use upstreams

* py-toolz available in upstream spack

* GitHub Action: Apply Pep8-formatting

* remove upstreams

* add version 0.12.3

* cython@2 for [email protected]

* GitHub Action: Apply Pep8-formatting

* inherit from upstream, introduce v 2.4.0

* GitHub Action: Apply Pep8-formatting

* lock pip to :23.0 for py-cmake

* lock eckit-version for infero

* temporary deactivate testsuite for int2lm

* Revert "temporary deactivate testsuite for int2lm"

This reverts commit 2834f46.

* remove gmake on Daint

* remove deprecated config

* add gmake again

* Remove faulty classification as "spack locking problem"

* [python] no default ssl package

* [fdb] Remove package and tests

* [fckit] Remove package and tests

* [numpy] Remove package and tests.

* Revert "[fckit] Remove package and tests"

This reverts commit fe41fc2.

* Fix FDB related tests (#920)

* test:fix(pytorch-fortran): try explicit dependency on (c/g)make%gcc

* upd: point to icon-c2sm branch spack_v0.21.1

* Update system_test.py

* GitHub Action: Apply Pep8-formatting

* upd: cosmo spack env

* skip failing tests

* GitHub Action: Apply Pep8-formatting

* add link to latest spack version

* downgrade icon4py,gt4py mostly to build-tests, add fdb again

* GitHub Action: Apply Pep8-formatting

* add upstreams for Daint

* add upstream to config

* adapt unit-test

* Use single-thread make for flexpart-cosmo

* Update system_test.py

* Fixes to gt4py in v0.21.1 (#937)

* locking typing extensions version

* Update system_test.py

* Update system_test.py

* Update system_test.py

* GitHub Action: Apply Pep8-formatting

---------

Co-authored-by: Abishek Gopal <[email protected]>
Co-authored-by: github-actions <[email protected]>

* Update system_test.py (#938)

* drop test for nvhpc-cpu ICON

* cleanup

* [py-gt4py] fixes to typing-extensions versions (#939)

* fixes to typing-extensions versions

* GitHub Action: Apply Pep8-formatting

* Adding typing-extensions v4.10.0

* fixing typo in versions

---------

Co-authored-by: github-actions <[email protected]>

* remove irrelevant test

* parametrize integration tests

* adapte trigger test

* cleanup

* GitHub Action: Apply Pep8-formatting

* fix bug

* exclude packages for spack spec

* GitHub Action: Apply Pep8-formatting

* first shot of test

* GitHub Action: Apply Pep8-formatting

* fix

* unique function names

* GitHub Action: Apply Pep8-formatting

* all tests ported

* GitHub Action: Apply Pep8-formatting

* use fixture for devirtualize_env

* GitHub Action: Apply Pep8-formatting

* speed up

* fix tests

* GitHub Action: Apply Pep8-formatting

* move unssuported packages closer to test

* GitHub Action: Apply Pep8-formatting

* drop claw

* GitHub Action: Apply Pep8-formatting

* fix broken tests

* remove test from deleted packages

* merge infero tests

* fix icon tests

* fix duplicate logfile error

* GitHub Action: Apply Pep8-formatting

* deactive gcc on Daint

* remove self

* check string in filename

---------

Co-authored-by: Jonas Jucker <[email protected]>
Co-authored-by: Dominic Hofer <[email protected]>
Co-authored-by: github-actions <[email protected]>
Co-authored-by: Victoria Cherkas <[email protected]>
Co-authored-by: Matthieu <[email protected]>
Co-authored-by: Michael Jähn <[email protected]>
Co-authored-by: abishekg7 <[email protected]>
Co-authored-by: Abishek Gopal <[email protected]>
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4 participants