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Overhaul of the package#33

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jkanche merged 64 commits intomasterBiocPy/rds2py:masterfrom rewriteBiocPy/rds2py:rewriteCopy head branch name to clipboardOct 25, 2024

+1,772-1,364

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Commits on Jan 25, 2024

• starting to rewrite

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Commits on Jan 31, 2024

• a few more things

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• Merge branch 'rewrite' of https://github.com/BiocPy/rds2py into rewrite

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Commits on Mar 18, 2024

• Merge branch 'master' of https://github.com/BiocPy/rds2py into rewrite

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• Merge branch 'rewrite' of https://github.com/BiocPy/rds2py into rewrite

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• reading atomics

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• remove cython generated file

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Commits on Mar 19, 2024

• import all from core

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• very confused why this fails

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• always use utf8 encoding/decoding

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• remove top level import

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Commits on Mar 26, 2024

• renaming cython bindings

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Commits on Jun 27, 2024

• commit the last thing

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Commits on Oct 9, 2024

• Merge branch 'master' into rewrite

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• read atomics

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• Merge branch 'rewrite' of https://github.com/BiocPy/rds2py into rewrite

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• remove build file

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Commits on Oct 17, 2024

• EOD

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Commits on Oct 22, 2024

• Merge branch 'master' into rewrite

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• minor changes

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• Merge branch 'rewrite' of https://github.com/BiocPy/rds2py into rewrite

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• finishing up parsers for base classes

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• Merge branch 'rewrite' of https://github.com/BiocPy/rds2py into rewrite

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• EOD

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• Merge branch 'rewrite' of https://github.com/BiocPy/rds2py into rewrite

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• finished granges

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• Merge branch 'rewrite' of https://github.com/BiocPy/rds2py into rewrite

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• macos-11 is deprecated

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Commits on Oct 23, 2024

• add se, rse

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• EOD

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• Merge branch 'rewrite' of https://github.com/BiocPy/rds2py into rewrite

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• EOD: parse dicts, fix for dframes with nrows, and trying to parse SCE

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Commits on Oct 24, 2024

• Merge branch 'rewrite' of https://github.com/BiocPy/rds2py into rewrite

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• streamlining dict objects

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• Merge branch 'rewrite' of https://github.com/BiocPy/rds2py into rewrite

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• remove history file

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• parse sce's

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Commits on Oct 25, 2024

• can now read MAE's

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• remove files

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• update pre-commit

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• Merge branch 'rewrite' of https://github.com/BiocPy/rds2py into rewrite

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• add ruffs formatter

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• remove top level exports

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• adding docstrings

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• almost ready for release, update docs

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• Merge branch 'rewrite' of https://github.com/BiocPy/rds2py into rewrite

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