[pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

README.md

@@ -4,15 +4,15 @@
 
 # rds2py
 
-Parse and construct Python representations for datasets stored in RDS files. `rds2py` supports various base classes from R, and Bioconductor's `SummarizedExperiment` and `SingleCellExperiment` S4 classes. ***For more details, check out [rds2cpp library](https://github.com/LTLA/rds2cpp).*** 
+Parse and construct Python representations for datasets stored in RDS files. `rds2py` supports various base classes from R, and Bioconductor's `SummarizedExperiment` and `SingleCellExperiment` S4 classes. ***For more details, check out [rds2cpp library](https://github.com/LTLA/rds2cpp).***
 
 > **Important Version Notice**
-> 
+>
 > Version 0.5.0 brings major changes to the package:
 > - Complete overhaul of the codebase using pybind11
 > - Streamlined readers for R data types
 > - Updated API for all classes and methods
-> 
+>
 > Please refer to the [documentation](https://biocpy.github.io/rds2py/) for the latest usage guidelines. Previous versions may have incompatible APIs.
 
 The package provides:

docs/tutorial.md

@@ -38,4 +38,4 @@ print(data)
 | dgCMatrix | scipy.sparse.csc_matrix |
 | dgRMatrix | scipy.sparse.csr_matrix |
 
-Check out the module reference for more information on these classes.
+Check out the module reference for more information on these classes.

src/rds2py/__init__.py

@@ -16,4 +16,4 @@
     del version, PackageNotFoundError
 
 from .generics import read_rds
-from .rdsutils import parse_rds
+from .rdsutils import parse_rds

src/rds2py/read_mae.py

@@ -44,8 +44,7 @@ def _sanitize_expts(expts, **kwargs):
 
 
 def read_multi_assay_experiment(robject: dict, **kwargs) -> MultiAssayExperiment:
-    """Convert an R `MultiAssayExperiment` to a Python 
-    :py:class:`~multiassayexperiment.MultiAssayExperiment` object.
+    """Convert an R `MultiAssayExperiment` to a Python :py:class:`~multiassayexperiment.MultiAssayExperiment` object.
 
     Args:
         robject:

src/rds2py/read_se.py

@@ -28,7 +28,7 @@ def _sanitize_assays(assays):
 
 
 def read_summarized_experiment(robject: dict, **kwargs) -> SummarizedExperiment:
-    """Convert an R SummarizedExperiment to Python 
+    """Convert an R SummarizedExperiment to Python
     :py:class:`~summarizedexperiment.SummarizedExperiment.SummarizedExperiment`.
 
     Args: