Fix issues with SE/SCE migration (#20).

Fix package versions, atleast until all packages are updated

setup.cfg

@@ -41,7 +41,7 @@ package_dir =
     =src
 
 # Require a min/specific Python version (comma-separated conditions)
-# python_requires = >=3.8
+python_requires = >=3.8
 
 # Add here dependencies of your project (line-separated), e.g. requests>=2.2,<3.0.
 # Version specifiers like >=2.2,<3.0 avoid problems due to API changes in
@@ -53,7 +53,11 @@ install_requires =
     numpy
     pandas
     scipy
-    biocpy
+    biocframe==0.3.20
+    singlecellexperiment==0.3.3
+    summarizedexperiment==0.3.7
+    anndata
+    mudata
 
 [options.packages.find]
 where = src

src/rds2py/interface.py

@@ -243,15 +243,15 @@ def as_summarized_experiment(
 
     if _cls == "SummarizedExperiment":
         return SummarizedExperiment(
-            assays=robj_asys, rowData=robj_rowdata, colData=robj_coldata
+            assays=robj_asys, row_data=robj_rowdata, col_data=robj_coldata
         )
     elif _cls == "SingleCellExperiment":
         return SingleCellExperiment(
             assays=robj_asys,
-            rowData=robj_rowdata,
-            colData=robj_coldata,
-            alterExps=robj_altExps,
-            reducedDims=robj_reduced_dims,
+            row_data=robj_rowdata,
+            col_data=robj_coldata,
+            alternative_experiments=robj_altExps,
+            reduced_dims=robj_reduced_dims,
         )
     else:
         raise TypeError(