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BiocPy · May 5, 2024 · f4ef853 · f4ef853
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diff --git a/.buildinfo b/.buildinfo
@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: 50fb4f92fca3864a00eeb3302c888ed9
+config: fa8b2be2ed6b6081f476f6c1395efeae
 tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/_modules/index.html b/_modules/index.html
@@ -1,14 +1,14 @@
 <!doctype html>
-<html class="no-js" lang="en">
+<html class="no-js" lang="en" data-content_root="../">
   <head><meta charset="utf-8"/>
     <meta name="viewport" content="width=device-width,initial-scale=1"/>
     <meta name="color-scheme" content="light dark"><link rel="index" title="Index" href="../genindex.html" /><link rel="search" title="Search" href="../search.html" />
 
-    <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>Overview: module code - pyBiocFileCache 0.2.2 documentation</title>
-      <link rel="stylesheet" type="text/css" href="../_static/pygments.css" />
-    <link rel="stylesheet" type="text/css" href="../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
-    <link rel="stylesheet" type="text/css" href="../_static/styles/furo-extensions.css?digest=30d1aed668e5c3a91c3e3bf6a60b675221979f0e" />
+    <!-- Generated with Sphinx 7.3.7 and Furo 2024.04.27 -->
+        <title>Overview: module code - pyBiocFileCache 0.3.0 documentation</title>
+      <link rel="stylesheet" type="text/css" href="../_static/pygments.css?v=fa44fd50" />
+    <link rel="stylesheet" type="text/css" href="../_static/styles/furo.css?v=437aa6ec" />
+    <link rel="stylesheet" type="text/css" href="../_static/styles/furo-extensions.css?v=36a5483c" />
 
 
 
@@ -111,6 +111,8 @@
   <div class="visually-hidden">Hide table of contents sidebar</div>
 </label>
 
+<a class="skip-to-content muted-link" href="#furo-main-content">Skip to content</a>
+
 
 
 <div class="page">
@@ -122,7 +124,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../index.html"><div class="brand">pyBiocFileCache 0.2.2 documentation</div></a>
+      <a href="../index.html"><div class="brand">pyBiocFileCache 0.3.0 documentation</div></a>
     </div>
     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -145,7 +147,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../index.html">
 
 
-  <span class="sidebar-brand-text">pyBiocFileCache 0.2.2 documentation</span>
+  <span class="sidebar-brand-text">pyBiocFileCache 0.3.0 documentation</span>
 
 </a><form class="sidebar-search-container" method="get" action="../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
@@ -197,7 +199,7 @@
             <i class="icon"><svg><use href="#svg-toc"></use></svg></i>
           </label>
         </div>
-        <article role="main">
+        <article role="main" id="furo-main-content">
           <h1>All modules for which code is available</h1>
 <ul><li><a href="pybiocfilecache/BiocFileCache.html">pybiocfilecache.BiocFileCache</a></li>
 <li><a href="pybiocfilecache/db/Base.html">pybiocfilecache.db.Base</a></li>
@@ -235,9 +237,9 @@ <h1>All modules for which code is available</h1>
 
     </aside>
   </div>
-</div><script data-url_root="../" id="documentation_options" src="../_static/documentation_options.js"></script>
-    <script src="../_static/doctools.js"></script>
-    <script src="../_static/sphinx_highlight.js"></script>
-    <script src="../_static/scripts/furo.js"></script>
+</div><script src="../_static/documentation_options.js?v=e259d695"></script>
+    <script src="../_static/doctools.js?v=9a2dae69"></script>
+    <script src="../_static/sphinx_highlight.js?v=dc90522c"></script>
+    <script src="../_static/scripts/furo.js?v=4e2eecee"></script>
     </body>
 </html>
diff --git a/_modules/pybiocfilecache/BiocFileCache.html b/_modules/pybiocfilecache/BiocFileCache.html
diff --git a/_modules/pybiocfilecache/db/Base.html b/_modules/pybiocfilecache/db/Base.html
@@ -1,14 +1,14 @@
 <!doctype html>
-<html class="no-js" lang="en">
+<html class="no-js" lang="en" data-content_root="../../../">
   <head><meta charset="utf-8"/>
     <meta name="viewport" content="width=device-width,initial-scale=1"/>
     <meta name="color-scheme" content="light dark"><link rel="index" title="Index" href="../../../genindex.html" /><link rel="search" title="Search" href="../../../search.html" />
 
-    <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>pybiocfilecache.db.Base - pyBiocFileCache 0.2.2 documentation</title>
-      <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
-    <link rel="stylesheet" type="text/css" href="../../../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
-    <link rel="stylesheet" type="text/css" href="../../../_static/styles/furo-extensions.css?digest=30d1aed668e5c3a91c3e3bf6a60b675221979f0e" />
+    <!-- Generated with Sphinx 7.3.7 and Furo 2024.04.27 -->
+        <title>pybiocfilecache.db.Base - pyBiocFileCache 0.3.0 documentation</title>
+      <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css?v=fa44fd50" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/styles/furo.css?v=437aa6ec" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/styles/furo-extensions.css?v=36a5483c" />
 
 
 
@@ -111,6 +111,8 @@
   <div class="visually-hidden">Hide table of contents sidebar</div>
 </label>
 
+<a class="skip-to-content muted-link" href="#furo-main-content">Skip to content</a>
+
 
 
 <div class="page">
@@ -122,7 +124,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../../../index.html"><div class="brand">pyBiocFileCache 0.2.2 documentation</div></a>
+      <a href="../../../index.html"><div class="brand">pyBiocFileCache 0.3.0 documentation</div></a>
     </div>
     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -145,7 +147,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../../../index.html">
 
 
-  <span class="sidebar-brand-text">pyBiocFileCache 0.2.2 documentation</span>
+  <span class="sidebar-brand-text">pyBiocFileCache 0.3.0 documentation</span>
 
 </a><form class="sidebar-search-container" method="get" action="../../../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
@@ -197,7 +199,7 @@
             <i class="icon"><svg><use href="#svg-toc"></use></svg></i>
           </label>
         </div>
-        <article role="main">
+        <article role="main" id="furo-main-content">
           <h1>Source code for pybiocfilecache.db.Base</h1><div class="highlight"><pre>
 <span></span><span class="kn">from</span> <span class="nn">sqlalchemy</span> <span class="kn">import</span> <span class="n">create_engine</span>
 <span class="kn">from</span> <span class="nn">sqlalchemy.engine</span> <span class="kn">import</span> <span class="n">Engine</span>
@@ -213,8 +215,10 @@ <h1>Source code for pybiocfilecache.db.Base</h1><div class="highlight"><pre>
 <span class="n">Base</span> <span class="o">=</span> <span class="n">declarative_base</span><span class="p">()</span>
 
 
-<div class="viewcode-block" id="create_schema"><a class="viewcode-back" href="../../../api/pybiocfilecache.db.html#pybiocfilecache.db.Base.create_schema">[docs]</a><span class="k">def</span> <span class="nf">create_schema</span><span class="p">(</span><span class="n">cache_dir</span><span class="p">:</span> <span class="nb">str</span><span class="p">)</span> <span class="o">-&gt;</span> <span class="n">Tuple</span><span class="p">[</span><span class="n">Engine</span><span class="p">,</span> <span class="n">sessionmaker</span><span class="p">]:</span>
-<span class="w">    </span><span class="sd">&quot;&quot;&quot;Create the schema in the sqlite database</span>
+<div class="viewcode-block" id="create_schema">
+<a class="viewcode-back" href="../../../api/pybiocfilecache.db.html#pybiocfilecache.db.Base.create_schema">[docs]</a>
+<span class="k">def</span> <span class="nf">create_schema</span><span class="p">(</span><span class="n">cache_dir</span><span class="p">:</span> <span class="nb">str</span><span class="p">)</span> <span class="o">-&gt;</span> <span class="n">Tuple</span><span class="p">[</span><span class="n">Engine</span><span class="p">,</span> <span class="n">sessionmaker</span><span class="p">]:</span>
+<span class="w">    </span><span class="sd">&quot;&quot;&quot;Create the schema in the sqlite database.</span>
 
 <span class="sd">    Args:</span>
 <span class="sd">        cache_dir (str): Location where the cache directory</span>
@@ -233,6 +237,7 @@ <h1>Source code for pybiocfilecache.db.Base</h1><div class="highlight"><pre>
         <span class="k">return</span> <span class="p">(</span><span class="n">engine</span><span class="p">,</span> <span class="n">sessionLocal</span><span class="p">)</span>
     <span class="k">except</span> <span class="ne">Exception</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
         <span class="k">raise</span> <span class="n">e</span></div>
+
 </pre></div>
         </article>
       </div>
@@ -265,9 +270,9 @@ <h1>Source code for pybiocfilecache.db.Base</h1><div class="highlight"><pre>
 
     </aside>
   </div>
-</div><script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
-    <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/sphinx_highlight.js"></script>
-    <script src="../../../_static/scripts/furo.js"></script>
+</div><script src="../../../_static/documentation_options.js?v=e259d695"></script>
+    <script src="../../../_static/doctools.js?v=9a2dae69"></script>
+    <script src="../../../_static/sphinx_highlight.js?v=dc90522c"></script>
+    <script src="../../../_static/scripts/furo.js?v=4e2eecee"></script>
     </body>
 </html>
diff --git a/_modules/pybiocfilecache/db/schema.html b/_modules/pybiocfilecache/db/schema.html
@@ -1,14 +1,14 @@
 <!doctype html>
-<html class="no-js" lang="en">
+<html class="no-js" lang="en" data-content_root="../../../">
   <head><meta charset="utf-8"/>
     <meta name="viewport" content="width=device-width,initial-scale=1"/>
     <meta name="color-scheme" content="light dark"><link rel="index" title="Index" href="../../../genindex.html" /><link rel="search" title="Search" href="../../../search.html" />
 
-    <!-- Generated with Sphinx 7.0.1 and Furo 2023.05.20 -->
-        <title>pybiocfilecache.db.schema - pyBiocFileCache 0.2.2 documentation</title>
-      <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
-    <link rel="stylesheet" type="text/css" href="../../../_static/styles/furo.css?digest=e6660623a769aa55fea372102b9bf3151b292993" />
-    <link rel="stylesheet" type="text/css" href="../../../_static/styles/furo-extensions.css?digest=30d1aed668e5c3a91c3e3bf6a60b675221979f0e" />
+    <!-- Generated with Sphinx 7.3.7 and Furo 2024.04.27 -->
+        <title>pybiocfilecache.db.schema - pyBiocFileCache 0.3.0 documentation</title>
+      <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css?v=fa44fd50" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/styles/furo.css?v=437aa6ec" />
+    <link rel="stylesheet" type="text/css" href="../../../_static/styles/furo-extensions.css?v=36a5483c" />
 
 
 
@@ -111,6 +111,8 @@
   <div class="visually-hidden">Hide table of contents sidebar</div>
 </label>
 
+<a class="skip-to-content muted-link" href="#furo-main-content">Skip to content</a>
+
 
 
 <div class="page">
@@ -122,7 +124,7 @@
       </label>
     </div>
     <div class="header-center">
-      <a href="../../../index.html"><div class="brand">pyBiocFileCache 0.2.2 documentation</div></a>
+      <a href="../../../index.html"><div class="brand">pyBiocFileCache 0.3.0 documentation</div></a>
     </div>
     <div class="header-right">
       <div class="theme-toggle-container theme-toggle-header">
@@ -145,7 +147,7 @@
       <div class="sidebar-sticky"><a class="sidebar-brand" href="../../../index.html">
 
 
-  <span class="sidebar-brand-text">pyBiocFileCache 0.2.2 documentation</span>
+  <span class="sidebar-brand-text">pyBiocFileCache 0.3.0 documentation</span>
 
 </a><form class="sidebar-search-container" method="get" action="../../../search.html" role="search">
   <input class="sidebar-search" placeholder="Search" name="q" aria-label="Search">
@@ -197,7 +199,7 @@
             <i class="icon"><svg><use href="#svg-toc"></use></svg></i>
           </label>
         </div>
-        <article role="main">
+        <article role="main" id="furo-main-content">
           <h1>Source code for pybiocfilecache.db.schema</h1><div class="highlight"><pre>
 <span></span><span class="kn">from</span> <span class="nn">sqlalchemy</span> <span class="kn">import</span> <span class="n">Column</span><span class="p">,</span> <span class="n">DateTime</span><span class="p">,</span> <span class="n">Integer</span><span class="p">,</span> <span class="n">String</span>
 <span class="kn">from</span> <span class="nn">sqlalchemy.sql</span> <span class="kn">import</span> <span class="n">func</span>
@@ -209,7 +211,9 @@ <h1>Source code for pybiocfilecache.db.schema</h1><div class="highlight"><pre>
 <span class="n">__license__</span> <span class="o">=</span> <span class="s2">&quot;MIT&quot;</span>
 
 
-<div class="viewcode-block" id="Metadata"><a class="viewcode-back" href="../../../api/pybiocfilecache.db.html#pybiocfilecache.db.schema.Metadata">[docs]</a><span class="k">class</span> <span class="nc">Metadata</span><span class="p">(</span><span class="n">Base</span><span class="p">):</span>
+<div class="viewcode-block" id="Metadata">
+<a class="viewcode-back" href="../../../api/pybiocfilecache.db.html#pybiocfilecache.db.schema.Metadata">[docs]</a>
+<span class="k">class</span> <span class="nc">Metadata</span><span class="p">(</span><span class="n">Base</span><span class="p">):</span>
     <span class="n">__tablename__</span> <span class="o">=</span> <span class="s2">&quot;metadata&quot;</span>
     <span class="n">key</span> <span class="o">=</span> <span class="n">Column</span><span class="p">(</span><span class="n">String</span><span class="p">(),</span> <span class="n">primary_key</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">index</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
     <span class="n">value</span> <span class="o">=</span> <span class="n">Column</span><span class="p">(</span><span class="n">String</span><span class="p">())</span>
@@ -218,7 +222,10 @@ <h1>Source code for pybiocfilecache.db.schema</h1><div class="highlight"><pre>
         <span class="k">return</span> <span class="s2">&quot;&lt;Metadata(key=&#39;</span><span class="si">%s</span><span class="s2">&#39;, valye=&#39;</span><span class="si">%s</span><span class="s2">&#39;)&gt;&quot;</span> <span class="o">%</span> <span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">key</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">value</span><span class="p">)</span></div>
 
 
-<div class="viewcode-block" id="Resource"><a class="viewcode-back" href="../../../api/pybiocfilecache.db.html#pybiocfilecache.db.schema.Resource">[docs]</a><span class="k">class</span> <span class="nc">Resource</span><span class="p">(</span><span class="n">Base</span><span class="p">):</span>
+
+<div class="viewcode-block" id="Resource">
+<a class="viewcode-back" href="../../../api/pybiocfilecache.db.html#pybiocfilecache.db.schema.Resource">[docs]</a>
+<span class="k">class</span> <span class="nc">Resource</span><span class="p">(</span><span class="n">Base</span><span class="p">):</span>
     <span class="n">__tablename__</span> <span class="o">=</span> <span class="s2">&quot;resource&quot;</span>
     <span class="nb">id</span> <span class="o">=</span> <span class="n">Column</span><span class="p">(</span><span class="n">Integer</span><span class="p">,</span> <span class="n">primary_key</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">index</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">autoincrement</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
     <span class="n">rid</span> <span class="o">=</span> <span class="n">Column</span><span class="p">(</span><span class="n">String</span><span class="p">())</span>
@@ -267,9 +274,9 @@ <h1>Source code for pybiocfilecache.db.schema</h1><div class="highlight"><pre>
 
     </aside>
   </div>
-</div><script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js"></script>
-    <script src="../../../_static/doctools.js"></script>
-    <script src="../../../_static/sphinx_highlight.js"></script>
-    <script src="../../../_static/scripts/furo.js"></script>
+</div><script src="../../../_static/documentation_options.js?v=e259d695"></script>
+    <script src="../../../_static/doctools.js?v=9a2dae69"></script>
+    <script src="../../../_static/sphinx_highlight.js?v=dc90522c"></script>
+    <script src="../../../_static/scripts/furo.js?v=4e2eecee"></script>
     </body>
 </html>