Update extinction_callback()

use_cases/tritrophic-biomass-vs-temperature.jl

@@ -3,7 +3,6 @@ import ColorSchemes: tol_light
 using CairoMakie
 using DataFrames
 using EcologicalNetworksDynamics
-import EcologicalNetworksDynamics: ExtinctionCallback
 
 # Temperature gradient from 0 to 40°C, converted to Kelvin, with increments of 1°.
 T0 = 273.15 # 0°C in Kelvin.
@@ -14,15 +13,14 @@ df = DataFrame(; T = Float64[], trophic_level = Int64[], Beq = Float64[])
 tmax = 315_360_000_000 # From Binzer et al., 2012.
 verbose = false # Do not show '@info' messages during simulation run.
 trophic_lvl = [1, 2, 3]
-callback_function(m) = ExtinctionCallback(1e-12, m._value, verbose)
 
 # Run simulations for each temperature across gradient.
 @info "Start simulations..."
 for T in T_values
     m = default_model(Foodweb([3 => 2, 2 => 1]), Temperature(T))
     m.h = 1 # Set hill exponent to 1.
     B0 = m.K[1] / 8 # Inital biomass.
-    callback = callback_function(m)
+    callback = extinction_callback(m, 1e-12)
     solution = simulate(m, B0; tmax, callback)
     Beq_vec = solution[end]
     for (Beq, tlvl) in zip(Beq_vec, trophic_lvl)