remove extra threads parameter

AroneyS · Apr 10, 2024 · e607ade · e607ade
1 parent b1178e6
commit e607ade
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/binchicken/workflow/scripts/target_elusive.py b/binchicken/workflow/scripts/target_elusive.py
@@ -21,6 +21,8 @@ def get_clusters(
         samples,
         PRECLUSTER_SIZE=2,
         MAX_COASSEMBLY_SAMPLES=2):
+    logging.info(f"Polars using {str(pl.thread_pool_size())} threads")
+
     if len(distances) == 0:
         return pl.DataFrame(schema={"samples": str})
 
@@ -220,7 +222,6 @@ def process_groups(df):
             samples,
             PRECLUSTER_SIZE=PRECLUSTER_SIZE,
             MAX_COASSEMBLY_SAMPLES=MAX_COASSEMBLY_SAMPLES,
-            threads=snakemake.threads
             )
     else:
         sample_preclusters = None