Support inline smiles

src/SmilesBlock.ts

@@ -75,11 +75,11 @@ export class SmilesBlock extends MarkdownRenderChild {
 
 		const isDQL = (source: string): boolean => {
 			const prefix = gDataview.settings.inlineQueryPrefix;
-			return source.startsWith(prefix);
+			return prefix.length > 0 && source.startsWith(prefix);
 		};
 		const isDataviewJs = (source: string): boolean => {
 			const prefix = gDataview.settings.inlineJsQueryPrefix;
-			return source.startsWith(prefix);
+			return prefix.length > 0 && source.startsWith(prefix);
 		};
 		const evaluateDQL = (row: string): string => {
 			const prefix = gDataview.settings.inlineQueryPrefix;

src/SmilesInline.ts

@@ -0,0 +1,315 @@
+/*
+	Adapted from https://github.com/blacksmithgu/obsidian-dataview/blob/master/src/ui/lp-render.ts
+	Refered to https://github.com/blacksmithgu/obsidian-dataview/pull/1247
+	More upstream from https://github.com/artisticat1/obsidian-latex-suite/blob/main/src/editor_extensions/conceal.ts
+*/
+
+import {
+	Decoration,
+	DecorationSet,
+	EditorView,
+	ViewPlugin,
+	ViewUpdate,
+	WidgetType,
+} from '@codemirror/view';
+import { EditorSelection, Range } from '@codemirror/state';
+import { syntaxTree, tokenClassNodeProp } from '@codemirror/language';
+import { ChemPluginSettings } from './settings/base';
+
+import { Component, editorInfoField, editorLivePreviewField } from 'obsidian';
+import { SyntaxNode } from '@lezer/common';
+
+import { gDrawer } from './global/drawer';
+import { i18n } from './lib/i18n';
+
+function selectionAndRangeOverlap(
+	selection: EditorSelection,
+	rangeFrom: number,
+	rangeTo: number
+) {
+	for (const range of selection.ranges) {
+		if (range.from <= rangeTo && range.to >= rangeFrom) {
+			return true;
+		}
+	}
+	return false;
+}
+
+class InlineWidget extends WidgetType {
+	constructor(
+		readonly source: string,
+		private el: HTMLElement,
+		private view: EditorView
+	) {
+		super();
+	}
+
+	eq(other: InlineWidget): boolean {
+		return other.source === this.source ? true : false;
+	}
+
+	toDOM(): HTMLElement {
+		return this.el;
+	}
+
+	// TODO: adjust this behavior
+	/* Make queries only editable when shift is pressed (or navigated inside with the keyboard
+	 * or the mouse is placed at the end, but that is always possible regardless of this method).
+	 * Mostly useful for links, and makes results selectable.
+	 * If the widgets should always be expandable, make this always return false.
+	 */
+	ignoreEvent(event: MouseEvent | Event): boolean {
+		// instanceof check does not work in pop-out windows, so check it like this
+		if (event.type === 'mousedown') {
+			const currentPos = this.view.posAtCoords({
+				x: (event as MouseEvent).x,
+				y: (event as MouseEvent).y,
+			});
+			if ((event as MouseEvent).shiftKey) {
+				// Set the cursor after the element so that it doesn't select starting from the last cursor position.
+				if (currentPos) {
+					const { editor } = this.view.state.field(editorInfoField);
+					if (editor) {
+						editor.setCursor(editor.offsetToPos(currentPos));
+					}
+				}
+				return false;
+			}
+		}
+		return true;
+	}
+}
+
+export function inlinePlugin(settings: ChemPluginSettings) {
+	const renderCell = (source: string, target: HTMLElement, theme: string) => {
+		const svg = target.createSvg('svg');
+		svg.setAttribute('xmlns', 'http://www.w3.org/2000/svg');
+		svg.setAttribute('data-smiles', source);
+
+		const errorCb = (
+			error: object & { name: string; message: string },
+			container: HTMLDivElement
+		) => {
+			container
+				.createDiv('error-source')
+				.setText(i18n.t('errors.source.title', { source }));
+			container.createEl('br');
+			const info = container.createEl('details');
+			info.createEl('summary').setText(error.name);
+			info.createEl('div').setText(error.message);
+
+			container.style.wordBreak = `break-word`;
+			container.style.userSelect = `text`;
+		};
+
+		gDrawer.draw(
+			source,
+			svg,
+			theme,
+			null,
+			(error: object & { name: string; message: string }) => {
+				target.empty();
+				errorCb(error, target.createEl('div'));
+			}
+		);
+		if (settings.options.scale == 0)
+			svg.style.width = `${settings.imgWidth.toString()}px`;
+		return svg;
+	};
+
+	return ViewPlugin.fromClass(
+		class {
+			decorations: DecorationSet;
+			component: Component;
+
+			constructor(view: EditorView) {
+				this.component = new Component();
+				this.component.load();
+				this.decorations = this.inlineRender(view) ?? Decoration.none;
+			}
+
+			update(update: ViewUpdate) {
+				// only activate in LP and not source mode
+				if (!update.state.field(editorLivePreviewField)) {
+					this.decorations = Decoration.none;
+					return;
+				}
+				if (update.docChanged) {
+					this.decorations = this.decorations.map(update.changes);
+					this.updateTree(update.view);
+				} else if (update.selectionSet) {
+					this.updateTree(update.view);
+				} else if (update.viewportChanged /*|| update.selectionSet*/) {
+					this.decorations =
+						this.inlineRender(update.view) ?? Decoration.none;
+				}
+			}
+
+			updateTree(view: EditorView) {
+				for (const { from, to } of view.visibleRanges) {
+					syntaxTree(view.state).iterate({
+						from,
+						to,
+						enter: ({ node }) => {
+							const { render, isQuery } = this.renderNode(
+								view,
+								node
+							);
+							if (!render && isQuery) {
+								this.removeDeco(node);
+								return;
+							} else if (!render) {
+								return;
+							} else if (render) {
+								this.addDeco(node, view);
+							}
+						},
+					});
+				}
+			}
+
+			removeDeco(node: SyntaxNode) {
+				this.decorations.between(
+					node.from - 1,
+					node.to + 1,
+					(from, to, value) => {
+						this.decorations = this.decorations.update({
+							filterFrom: from,
+							filterTo: to,
+							filter: (from, to, value) => false,
+						});
+					}
+				);
+			}
+
+			addDeco(node: SyntaxNode, view: EditorView) {
+				const from = node.from - 1;
+				const to = node.to + 1;
+				let exists = false;
+				this.decorations.between(from, to, (from, to, value) => {
+					exists = true;
+				});
+				if (!exists) {
+					/**
+					 * In a note embedded in a Canvas, app.workspace.getActiveFile() returns
+					 * the canvas file, not the note file. On the other hand,
+					 * view.state.field(editorInfoField).file returns the note file itself,
+					 * which is more suitable here.
+					 */
+					const currentFile = view.state.field(editorInfoField).file;
+					if (!currentFile) return;
+					const newDeco = this.renderWidget(node, view)?.value;
+					if (newDeco) {
+						this.decorations = this.decorations.update({
+							add: [{ from: from, to: to, value: newDeco }],
+						});
+					}
+				}
+			}
+
+			// checks whether a node should get rendered/unrendered
+			renderNode(view: EditorView, node: SyntaxNode) {
+				const type = node.type;
+				const tokenProps = type.prop<string>(tokenClassNodeProp);
+				const props = new Set(tokenProps?.split(' '));
+				if (props.has('inline-code') && !props.has('formatting')) {
+					const start = node.from;
+					const end = node.to;
+					const selection = view.state.selection;
+					if (
+						selectionAndRangeOverlap(selection, start - 1, end + 1)
+					) {
+						if (this.isInlineSmiles(view, start, end)) {
+							return { render: false, isQuery: true };
+						} else {
+							return { render: false, isQuery: false };
+						}
+					} else if (this.isInlineSmiles(view, start, end)) {
+						return { render: true, isQuery: true };
+					}
+				}
+				return { render: false, isQuery: false };
+			}
+
+			isInlineSmiles(view: EditorView, start: number, end: number) {
+				if (settings.inlineSmilesPrefix.length > 0) {
+					const text = view.state.doc.sliceString(start, end);
+					return text.startsWith(settings.inlineSmilesPrefix);
+				} else return false;
+			}
+
+			inlineRender(view: EditorView) {
+				const currentFile = view.state.field(editorInfoField).file;
+				if (!currentFile) return;
+
+				const widgets: Range<Decoration>[] = [];
+
+				for (const { from, to } of view.visibleRanges) {
+					syntaxTree(view.state).iterate({
+						from,
+						to,
+						enter: ({ node }) => {
+							if (!this.renderNode(view, node).render) return;
+							const widget = this.renderWidget(node, view);
+							if (widget) {
+								widgets.push(widget);
+							}
+						},
+					});
+				}
+				return Decoration.set(widgets, true);
+			}
+
+			renderWidget(node: SyntaxNode, view: EditorView) {
+				// contains the position of inline code
+				const start = node.from;
+				const end = node.to;
+				// safety net against unclosed inline code
+				if (view.state.doc.sliceString(end, end + 1) === '\n') {
+					return;
+				}
+				const text = view.state.doc.sliceString(start, end);
+				const el = createSpan({
+					cls: ['smiles', 'chem-cell-inline', 'chem-cell'],
+				});
+				/* If the query result is predefined text (e.g. in the case of errors), set innerText to it.
+				 * Otherwise, pass on an empty element and fill it in later.
+				 * This is necessary because {@link InlineWidget.toDOM} is synchronous but some rendering
+				 * asynchronous.
+				 */
+
+				let code = '';
+				if (text.startsWith(settings.inlineSmilesPrefix)) {
+					if (settings.inlineSmiles) {
+						// TODO move validation forward, ensure to call native renderer when no smiles
+						code = text
+							.substring(settings.inlineSmilesPrefix.length)
+							.trim();
+
+						renderCell(
+							code,
+							el.createDiv(),
+							document.body.hasClass('theme-dark') &&
+								!document.body.hasClass('theme-light')
+								? settings.darkTheme
+								: settings.lightTheme
+						);
+					}
+				} else {
+					return;
+				}
+
+				return Decoration.replace({
+					widget: new InlineWidget(code, el, view),
+					inclusive: false,
+					block: false,
+				}).range(start - 1, end + 1);
+			}
+
+			destroy() {
+				this.component.unload();
+			}
+		},
+		{ decorations: (v) => v.decorations }
+	);
+}

src/lib/translations/en.json

@@ -76,8 +76,19 @@
             "dataview": {
                 "title": "Dataview",
                 "enable": {
-                    "name": "Inline Dataview",
-                    "description": "Recognize and get return values from Dataview queries and DataviewJS lines as rendering source according to Dataview settings."
+                    "name": "Parse Dataview",
+                    "description": "In smiles block, recognize and get return values from Dataview queries and DataviewJS lines as rendering source according to Dataview settings."
+                }
+            },
+            "inline": {
+                "title": "Inline SMILES",
+                "enable": {
+                    "name": "Enable inline SMILES",
+                    "description": "Render SMILES code lines."
+                },
+                "prefix": {
+                    "name": "Inline SMILES Prefix",
+                    "description": "The prefix to inline SMILES."
                 }
             }
         }

src/lib/translations/zh-CN.json

@@ -79,6 +79,17 @@
                     "name": "解析 Dataview",
                     "description": "根据 Dataview 插件设置，识别并执行 smiles 代码块中的 Dataview 查询式 (Queries) 和 DataviewJS 代码，依查询结果渲染结构。"
                 }
+            },
+            "inline": {
+                "title": "行内 SMILES 渲染",
+                "enable": {
+                    "name": "启用行内 SMILES",
+                    "description": "渲染行内代码形式的 SMILES 字符串。"
+                },
+                "prefix": {
+                    "name": "前缀",
+                    "description": "行内 SMILES 的前缀。"
+                }
             }
         }
     }