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update gsc-scran_normalize tool
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drosofff committed Nov 7, 2024
1 parent 9286176 commit 522b03b
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Showing 2 changed files with 5 additions and 1 deletion.
1 change: 1 addition & 0 deletions tools/gsc_scran_normalize/.shed.yml
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Expand Up @@ -6,6 +6,7 @@ long_description: |
Normalizes raw counts expression matrix using deconvolution size factors
categories:
- Transcriptomics
- Single Cell
homepage_url: http://artbio.fr
remote_repository_url: https://github.com/ARTbio/tools-artbio/tree/main/tools/gsc_scran_normalize
toolshed:
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5 changes: 4 additions & 1 deletion tools/gsc_scran_normalize/scran_normalize.xml
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@@ -1,5 +1,8 @@
<tool id="scran_normalize" name="scran_normalize" version="1.28.1+galaxy0">
<tool id="scran_normalize" name="scran_normalize" version="1.28.1+galaxy1">
<description>Normalize raw counts expression values using deconvolution size factors</description>
<xrefs>
<xref type="bio.tools">galaxy_single_cell_suite</xref>
</xrefs>
<requirements>
<requirement type="package" version="1.28.1">bioconductor-scran</requirement>
<requirement type="package" version="1.63_1">r-dynamictreecut</requirement>
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