Merge pull request #623 from ARTbio/deprecate_gsc_cpm_rpk

Deprecate gsc_cpm_tpm_rpk
ARTbio · Oct 5, 2023 · 4016d26 · 4016d26
2 parents a8486c8 + d04f762
commit 4016d26
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diff --git a/tools/gsc_cpm_tpm_rpk/.shed.yml → deprecated/gsc_cpm_tpm_rpk/.shed.yml b/tools/gsc_cpm_tpm_rpk/.shed.yml → deprecated/gsc_cpm_tpm_rpk/.shed.yml
diff --git a/tools/gsc_cpm_tpm_rpk/cpm_tpm_rpk.R → deprecated/gsc_cpm_tpm_rpk/cpm_tpm_rpk.R b/tools/gsc_cpm_tpm_rpk/cpm_tpm_rpk.R → deprecated/gsc_cpm_tpm_rpk/cpm_tpm_rpk.R
diff --git a/tools/gsc_cpm_tpm_rpk/cpm_tpm_rpk.xml → deprecated/gsc_cpm_tpm_rpk/cpm_tpm_rpk.xml b/tools/gsc_cpm_tpm_rpk/cpm_tpm_rpk.xml → deprecated/gsc_cpm_tpm_rpk/cpm_tpm_rpk.xml
diff --git a/tools/gsc_cpm_tpm_rpk/test-data/counts.tab → ...ated/gsc_cpm_tpm_rpk/test-data/counts.tab b/tools/gsc_cpm_tpm_rpk/test-data/counts.tab → ...ated/gsc_cpm_tpm_rpk/test-data/counts.tab
diff --git a/tools/gsc_cpm_tpm_rpk/test-data/cpm.tab → deprecated/gsc_cpm_tpm_rpk/test-data/cpm.tab b/tools/gsc_cpm_tpm_rpk/test-data/cpm.tab → deprecated/gsc_cpm_tpm_rpk/test-data/cpm.tab
diff --git a/...gsc_cpm_tpm_rpk/test-data/gene_length.tab → ...gsc_cpm_tpm_rpk/test-data/gene_length.tab b/...gsc_cpm_tpm_rpk/test-data/gene_length.tab → ...gsc_cpm_tpm_rpk/test-data/gene_length.tab
diff --git a/tools/gsc_cpm_tpm_rpk/test-data/logcpm.tab → ...ated/gsc_cpm_tpm_rpk/test-data/logcpm.tab b/tools/gsc_cpm_tpm_rpk/test-data/logcpm.tab → ...ated/gsc_cpm_tpm_rpk/test-data/logcpm.tab
diff --git a/tools/gsc_cpm_tpm_rpk/test-data/logrpk.tab → ...ated/gsc_cpm_tpm_rpk/test-data/logrpk.tab b/tools/gsc_cpm_tpm_rpk/test-data/logrpk.tab → ...ated/gsc_cpm_tpm_rpk/test-data/logrpk.tab
diff --git a/tools/gsc_cpm_tpm_rpk/test-data/logtpm.tab → ...ated/gsc_cpm_tpm_rpk/test-data/logtpm.tab b/tools/gsc_cpm_tpm_rpk/test-data/logtpm.tab → ...ated/gsc_cpm_tpm_rpk/test-data/logtpm.tab
diff --git a/tools/gsc_cpm_tpm_rpk/test-data/none.tab → ...ecated/gsc_cpm_tpm_rpk/test-data/none.tab b/tools/gsc_cpm_tpm_rpk/test-data/none.tab → ...ecated/gsc_cpm_tpm_rpk/test-data/none.tab
diff --git a/tools/gsc_cpm_tpm_rpk/test-data/rpk.tab → deprecated/gsc_cpm_tpm_rpk/test-data/rpk.tab b/tools/gsc_cpm_tpm_rpk/test-data/rpk.tab → deprecated/gsc_cpm_tpm_rpk/test-data/rpk.tab
diff --git a/tools/gsc_cpm_tpm_rpk/test-data/tpm.tab → deprecated/gsc_cpm_tpm_rpk/test-data/tpm.tab b/tools/gsc_cpm_tpm_rpk/test-data/tpm.tab → deprecated/gsc_cpm_tpm_rpk/test-data/tpm.tab