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collapse parameter clean
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ACEnglish committed Jan 11, 2024
1 parent 0474d15 commit c44d25c
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2 changes: 0 additions & 2 deletions truvari/collapse.py
Original file line number Diff line number Diff line change
Expand Up @@ -470,8 +470,6 @@ def parse_args(args):
help="Min pct reciprocal overlap (%(default)s) for DEL events")
thresg.add_argument("-t", "--typeignore", action="store_true", default=False,
help="Variant types don't need to match to compare (%(default)s)")
thresg.add_argument("--use-lev", action="store_true",
help="Use the Levenshtein distance ratio instead of edlib editDistance ratio (%(default)s)")

parser.add_argument("--hap", action="store_true", default=False,
help="Collapsing a single individual's haplotype resolved calls (%(default)s)")
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