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Network tube #240

Merged
merged 42 commits into from
Nov 23, 2023
Merged

Network tube #240

merged 42 commits into from
Nov 23, 2023

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rchristie
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Supply construction object to interactive functions. Requires simultaneous update to Scaffold Creator.
Make network layout structure hidden and editable only from new interactive function.
Support Hermite serendipity basis for tube bifurcation and track surface generation.
Improve loop handling in TrackSurface.
TrackSurface findNearestPosition now converges with oscillations for distant points.
TrackSurface generateMesh fixed for loop1.
Support cross derivatives in TrackSurface.
Fix finding nearest parameter point when one is 0 distance away.
Jolt xi location to get out of local minimum.
Stay sticky on boundary for 4 iterations.
Solve quadratic to get next estimate of intersection for all cases now.
Starting point for finding intersection curve is not based on element centres.
Fix trim surfaces when distorting due to convergence.
Make serendipity basis tube network option.
Fix network mesh node templates.
Add network layout interactive function for scaling side derivatives.
Add all network layout default parameters for tube network.
Put try/except around tube bifurcation tree generation in case of exception due to crazy inputs.
Insert absent derivatives into TrackSurface intersection curve.
Reduce incidents of non-convergence of TrackSurface.getNearestPoint() by incrementally reducing MAX_MAG_DXI.
Add tube network test.
Add function for assigning inner coordinates as a function of outer coordinates.
Add missing d13 to sphere cube network layout and update test answers.
Fix single segment loop networks.
Add loop tube network parameter set.
Spread out default network coordinates better, and reduce side derivatives.
Redefine bifurcation parameter set to be symmetric.
Can set assign any coordinates from any other coordinates.
Remove scale utility code.
Fix left handed coordinate system for loop network.
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Works well. Just some minor changes required to fix typo and update missing information in docstrings

src/scaffoldmaker/meshtypes/meshtype_1d_network_layout1.py Outdated Show resolved Hide resolved
src/scaffoldmaker/meshtypes/meshtype_1d_network_layout1.py Outdated Show resolved Hide resolved
src/scaffoldmaker/utils/interpolation.py Outdated Show resolved Hide resolved
src/scaffoldmaker/utils/interpolation.py Show resolved Hide resolved
src/scaffoldmaker/utils/networkmesh.py Outdated Show resolved Hide resolved
src/scaffoldmaker/utils/bifurcation.py Outdated Show resolved Hide resolved
src/scaffoldmaker/utils/bifurcation.py Outdated Show resolved Hide resolved
tests/test_general.py Outdated Show resolved Hide resolved
tests/test_general.py Show resolved Hide resolved
tests/test_general.py Show resolved Hide resolved
@rchristie rchristie merged commit e7fb178 into ABI-Software:main Nov 23, 2023
@rchristie rchristie deleted the network_tube branch November 23, 2023 00:55
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2 participants