From 0edf66b891bf570043299986a21b864edbda45ce Mon Sep 17 00:00:00 2001
From: Martin Larralde <martin.larralde@embl.de>
Date: Thu, 23 Nov 2023 10:47:42 +0100
Subject: [PATCH] Release v0.9.9

---
 CHANGELOG.md      | 17 ++++++++++++++++-
 gecco/__init__.py |  2 +-
 2 files changed, 17 insertions(+), 2 deletions(-)

diff --git a/CHANGELOG.md b/CHANGELOG.md
index 8c88c95..225a57e 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -5,7 +5,22 @@ The format is based on [Keep a Changelog](http://keepachangelog.com/en/1.0.0/)
 and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0.html).
 
 ## [Unreleased]
-[Unreleased]: https://github.com/zellerlab/GECCO/compare/v0.9.8...master
+[Unreleased]: https://github.com/zellerlab/GECCO/compare/v0.9.9...master
+
+
+## [v0.9.9] - 2023-11-23
+[v0.9.9]: https://github.com/zellerlab/GECCO/compare/v0.9.8...v0.9.9
+
+### Added
+- Support for `gzip`, `bzip2`, `lz4` and `xz`-compressed input files.
+
+### Fixed
+- Outdated use of `pandas` API in `gecco cv` command.
+
+### Changed
+- Bump `pyhmmer` dependency to `v0.10.0`.
+- Bump `pyrodigal` dependency to `v3.0.0`.
+- Make `gecco cv` output a gene table with a ground truth column.
 
 
 ## [v0.9.8] - 2023-06-09
diff --git a/gecco/__init__.py b/gecco/__init__.py
index 4dac7c1..3b51535 100644
--- a/gecco/__init__.py
+++ b/gecco/__init__.py
@@ -10,4 +10,4 @@
 
 __author__ = "Martin Larralde"
 __license__ = "GPLv3"
-__version__ = "0.9.8"
+__version__ = "0.9.9"