From c9524e38d090a3cbe6851d13151eac1ff4b5ce20 Mon Sep 17 00:00:00 2001 From: Susanna Kiwala Date: Wed, 28 Feb 2024 14:49:29 -0600 Subject: [PATCH 1/2] Upgrade to pVACtools version 4.1.0 --- definitions/tools/pvacfuse.wdl | 2 +- definitions/tools/pvacseq.wdl | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/definitions/tools/pvacfuse.wdl b/definitions/tools/pvacfuse.wdl index adc3cbe..74d7256 100644 --- a/definitions/tools/pvacfuse.wdl +++ b/definitions/tools/pvacfuse.wdl @@ -35,7 +35,7 @@ task pvacfuse { runtime { preemptible: 1 maxRetries: 2 - docker: "griffithlab/pvactools:4.0.8" + docker: "griffithlab/pvactools:4.1.0" memory: "16GB" cpu: n_threads disks: "local-disk ~{space_needed_gb} HDD" diff --git a/definitions/tools/pvacseq.wdl b/definitions/tools/pvacseq.wdl index 864bdf8..6887b30 100644 --- a/definitions/tools/pvacseq.wdl +++ b/definitions/tools/pvacseq.wdl @@ -56,7 +56,7 @@ task pvacseq { maxRetries: 2 memory: "16GB" cpu: n_threads - docker: "griffithlab/pvactools:4.0.8" + docker: "griffithlab/pvactools:4.1.0" disks: "local-disk ~{space_needed_gb} HDD" } From 1f4216400f8f538723357e8f0ed1d9d4fd15fc30 Mon Sep 17 00:00:00 2001 From: Susanna Kiwala Date: Wed, 13 Mar 2024 14:47:18 -0500 Subject: [PATCH 2/2] Upgrade to pVACtools version 4.1.1 --- definitions/tools/pvacfuse.wdl | 2 +- definitions/tools/pvacseq.wdl | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/definitions/tools/pvacfuse.wdl b/definitions/tools/pvacfuse.wdl index 74d7256..c42f4b4 100644 --- a/definitions/tools/pvacfuse.wdl +++ b/definitions/tools/pvacfuse.wdl @@ -35,7 +35,7 @@ task pvacfuse { runtime { preemptible: 1 maxRetries: 2 - docker: "griffithlab/pvactools:4.1.0" + docker: "griffithlab/pvactools:4.1.1" memory: "16GB" cpu: n_threads disks: "local-disk ~{space_needed_gb} HDD" diff --git a/definitions/tools/pvacseq.wdl b/definitions/tools/pvacseq.wdl index 6887b30..517c7ac 100644 --- a/definitions/tools/pvacseq.wdl +++ b/definitions/tools/pvacseq.wdl @@ -56,7 +56,7 @@ task pvacseq { maxRetries: 2 memory: "16GB" cpu: n_threads - docker: "griffithlab/pvactools:4.1.0" + docker: "griffithlab/pvactools:4.1.1" disks: "local-disk ~{space_needed_gb} HDD" }