buffer overflow detected

[arunprasanna83]

Hello,
I tried to run scaff_reads on my 10X raw data with:
scaff_data reads.dat reads_1.fastq reads_2.fastq > try.out
Where, my reads.dat file had:
q1 = /10X_RAWDATA/S1_L008_R1_001.fastq.gz
q2=/10X_RAWDATA/S1_L008_R2_001.fastq.gz

I get the following error:

buffer overflow detected: scaff_reads terminated
Aborted (core dumped)

Please let me know, how to solve this issue ? I am running it on 40 core workstation with 125GB RAM. Instead of this, can I use barcoded.fastq.gz file produced by 'longranger basic' ?

Thanks in Advance,
AP

[longzhangnation]

@arunprasanna83 you need to specify one scaff10x,and there are two scaff10x in the scaff10x dictory ,one in Scaff10X/src,another in /Scaff10X/src/scaff-bin. You need to use the full path of scaff10X in ' Scaff10X/src'. I hope it could help you .