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unfortunately no logs were created, the only output I have is :
converting y to a factor. label ordering used for training psupertime is:
0, 2, 12, 24
1 genes have insufficient expression and will not be used as input to psupertime
processing data
checking for zero SD genes
denoising data
scaling data
hyphens detected in the following gene names:
MT-ND5, MT-ATP6, MT-CO3, MT-CYB, AZIN1-AS1, MT-ND2, MT-ND4, MT-ND1, MT-ND3, MT-ND4L, HLA-DRA, BASP1-AS1
these have been replaced with .s
processed data is 42780 cells * 399 genes
cross-validation training, 5 folds:
fold 1
fold 2
fold 3
fold 4
fold 5
fitting best model with all training data
psupertime object using 42780 cells * 400 genes as input
label ordering used for training: 0, 2, 12, 24
genes selected for input: all
# genes taken forward for training: 399
# genes identified as relevant: 239 (= 60% of training genes)
mean training accuracy: 52%
mean test accuracy: 52%
Error: unexpected end of input
Execution halted
The text was updated successfully, but these errors were encountered:
unfortunately no logs were created, the only output I have is :
converting y to a factor. label ordering used for training psupertime is:
0, 2, 12, 24
1 genes have insufficient expression and will not be used as input to psupertime
processing data
checking for zero SD genes
denoising data
scaling data
hyphens detected in the following gene names:
MT-ND5, MT-ATP6, MT-CO3, MT-CYB, AZIN1-AS1, MT-ND2, MT-ND4, MT-ND1, MT-ND3, MT-ND4L, HLA-DRA, BASP1-AS1
these have been replaced with .s
processed data is 42780 cells * 399 genes
cross-validation training, 5 folds:
fold 1
fold 2
fold 3
fold 4
fold 5
fitting best model with all training data
psupertime object using 42780 cells * 400 genes as input
label ordering used for training: 0, 2, 12, 24
genes selected for input: all
# genes taken forward for training: 399
# genes identified as relevant: 239 (= 60% of training genes)
mean training accuracy: 52%
mean test accuracy: 52%
Error: unexpected end of input
Execution halted
The text was updated successfully, but these errors were encountered: