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Principal components are there in the tibble representation
spatial_data|> as_tibble() |> colnames()
But cannot be selected
spatial_data|> select(PC1)
Errorin`select_helper()`:!Can't select columns that don'texist.
✖ Column`PC1`doesn't exist.
However, tidySCE can
spatial_data|> as("SingleCellExperiment") |> select(PC1)
tidySingleCellExperimentsays:Keycolumnsaremissing.Adataframeisreturnedforindependentdataanalysis.# A tibble: 47,681 × 1PC1<dbl>1-2.0423.363-6.824-17.650.37160.4687-7.078-1.2493.47102.78# ℹ 47,671 more rows# ℹ Use `print(n = ...)` to see more rows
The text was updated successfully, but these errors were encountered:
Principal components are there in the tibble representation
But cannot be selected
However,
tidySCE
canThe text was updated successfully, but these errors were encountered: