- add BZIP2 (.bz2) support for reading fasta and fastq (#185)
- finish transition to file options (#166)
- remove readers (#165)
- logical vs physical plan mismatch (#162)
- add sdf read options (#161)
- add bed file option inference (#156)
- add gff file extension and compression inference (#155)
- infer options from file name (#153)
- add FastaSequenceDataType import (#151)
- support more bed options (#146)
- update FASTA for encoding and copy (#139)
- new exon to fix overflow (#135)
- simplify bounds
- improve vcf table options (#128)
- better annotations
- update other parts of build
- update other parts of build
- update version
- update version
- update python versions
- add cram and fcs (#127)
- add bed and bigwig (#124)
- add bam and sam reader methods (#123)
- add vcf read (#121)
- add type annotations (#120)
- better obj creation (#117)
- update exon to v13
- update exon to v0.12 (#107)
- add fastq/fasta reader on a session (#105)
- fix value error for missing file (#92)
- fix version (#91)
- update exon to support bgzip (#90)
- add execute method on session (#77)
- add back record batch reader (#76)
- update README with session example
- improve df creation (#64)
- add baack armv7
- update exon beta
- build remove extra opt
- use 0.3.4 (#63)
- add to_polars for result (#62)
- session context (#59)
- update exon version (#56)
- add to_pandas (#51)
- update exon for faster scans (#50)
- add conda forge to bb test (#48)
- IC for mzml in biobear (#46)
- bump exon
- add exhausted check to avoid panic (#43)
- update exon (#42)
- fix filename
- cleanup interface (#34)
- add bcf query reader (#33)
- add GTF table source (#32)
- add s3 and gcs readers (#30)
- add querying (#29)
- gzip for genbank reader (#28)
- use exon reader (#27)
- path type (#26)
- add genbank + better gff (#24)
- add gff gzip reader (#23)
- turn vcf reader into record batch reader (#21)
- add fastq reader (#20)
- bam reader as record batch (#19)
- use record batch reader for gff (#18)
- replace IPC with RecordBatchReader for fasta (#16)
- clean-up batch serialization (#14)
- update similar
- add similar packages to README
- add smoke test
- pare to minimal smoke test
- windows pipes
- trailing space
- remove to arrow functions (#22)
- cleanup fasta reader (#17)
- support gzipped for fasta/q (#4)
- add error handling (#1)
- clean up readme
- update tests docs
- add readers
- proper tag setup
- update with docs
- add python lib separately
- add python wrapper
- add bam and vcf readers
- add reader
- ic