python-app.yml

name: Test DeepIceDrain

on:
  push:
    branches:
      - main
  pull_request:
    branches:
      - "**"

jobs:
  test:
    name: ${{ matrix.os }} - Python ${{ matrix.python-version }}
    runs-on: ${{ matrix.os }}
    strategy:
      max-parallel: 1
      fail-fast: false
      matrix:
        python-version: [3.8]
        os: [ubuntu-22.04]
    defaults:
      run:
        shell: bash -l {0}

    steps:
      - name: Checkout current git repository
        uses: actions/checkout@v2.2.0

      - name: Setup Mambaforge
        uses: conda-incubator/setup-miniconda@v2.1.1
        with:
          activate-environment: deepicedrain
          channels: conda-forge
          miniforge-version: latest
          miniforge-variant: Mambaforge
          mamba-version: "*"
          use-mamba: true
          environment-file: environment-linux-64.lock
          show-channel-urls: true

      - name: Install Poetry python dependencies
        run: poetry install --no-root

      - name: Install deepicedrain package
        run: poetry install

      # Pull test data from dvc remote (DAGsHub)
      - name: Pull test data from dvc remote
        run: |
          dvc pull ATLXI/df_dhdt_slessor_downstream.parquet \
                   ATLXI/df_dhdt_whillans_upstream.parquet \
                   ATLXI/df_dhdt_whillans_downstream.parquet
          ls -lhR ATLXI/

      - name: Display virtualenv and installed package information
        run: |
          mamba info
          mamba list
          poetry env info
          poetry show

      - name: Code Quality
        run: poetry run black . --check

      - name: Test with pytest
        run: poetry run pytest --verbose --doctest-modules deepicedrain/