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  1. GeneMates GeneMates Public

    An R package identifying horizontal gene co-transfer between bacteria using association analysis and whole-genome sequences

    R 24 2

  2. NITREc NITREc Public

    Chromosomal mutations associated with nitrofurantoin resistance in Escherichia coli

    Python 1

  3. readSimulator readSimulator Public

    Simulating paired-end short sequencing reads from circular and linear genomes

    Python 10 3

  4. BINF_toolkit BINF_toolkit Public

    Handy scripts for routine bioinformatic analysis

    Python 21 8

  5. Assembly_toolkit Assembly_toolkit Public

    Scripts for de novo genome assembly

    Shell

  6. Taxonomy_toolkit Taxonomy_toolkit Public

    Scripts facilitating taxonomical analysis

    Shell