05/06/2022
Update the data with the Expert Panel annotations and the R Markdown for this manuscript:
- Garcia et al. (2022 - Submitted). "Development of Training Materials for Pathologists to Provide Machine Learning Validation Data of Tumor-Infiltrating Lymphocytes in Breast Cancer," Cancers.
Changes include:
- New
modalityID = "camic-expert"
that denotes the annotations from our Expert Panel. - Two new batches,
batch = "FDA-HTT-Train001"
and"FDA-HTT-Train002"
. These batches contain the ROIs scored by the Expert Panel. - New
readerID
of the experts appear as“expert****”
- The R Markdown used to create the figures in the Cancers paper and a
copy of the PDF output are available in the folder
inst/extra/20220506-GarciaCancersPaper
to simplify reproducibility of the paper in case some data formatting changes in the currentpilotHTT
data frame.
Creation of the HTT Project's Pilot Study annotation dataset.