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FAQ
Kjetil Klepper edited this page Apr 16, 2024
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- How to access the servers with SSH
- How to restart Galaxy and manage other services
- How to get information from the Galaxy logs
- Which services are needed by Galaxy
- How to add a Server Alert on the welcome page
- Job management with Slurm
- How to add a new tool
- How to add a new tool to NeLS Tool Shed
- How to debug a tool that has failed (DRAFT DOCUMENT) 🔗
- How to find the tool wrapper for a particular tool
- How to find the container for a particular tool
- How to manually build a container image for a tool
- How to update the default container
- How to force a tool to use Conda, and not Singularity
- How to specify that a tool has certain CPU or memory requirements
- How to force a tool to run on a specific compute node
- How to run Ansible playbooks
- How to update playbooks
- How to upgrade Galaxy to a new release
- How to grant a new Galaxy Admin SSH access to the servers
- How to update the playbooks to grant a Galaxy user access to the Admin page in Galaxy
- How to edit the welcome page
- How to make changes to the NeLS style
[Kjetil] - Which core Galaxy files are replaced with customized substitutions from our playbooks
- Troubleshooting guide
- Playbooks troubleshooting guide
- Tool problems troubleshooting flowchart
- How to restore the UseGalaxy.no server from backup