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README.md

Test files for htsget-rs

This directory contains test and example files for htsget-rs.

Crypt4GH

Crypt4GH keys were generated by running:

cargo install crypt4gh
crypt4gh keygen --sk c4gh/keys/alice.sec --pk c4gh/keys/alice.pub
crypt4gh keygen --sk c4gh/keys/bob.sec --pk c4gh/keys/bob.pub

Files were encrypted by running:

crypt4gh encrypt --sk c4gh/keys/alice.sec --recipient_pk c4gh/keys/bob.pub < bam/htsnexus_test_NA12878.bam > c4gh/htsnexus_test_NA12878.bam.c4gh
crypt4gh encrypt --sk c4gh/keys/alice.sec --recipient_pk c4gh/keys/bob.pub < bcf/sample1-bcbio-cancer.bcf > c4gh/sample1-bcbio-cancer.bcf.c4gh
crypt4gh encrypt --sk c4gh/keys/alice.sec --recipient_pk c4gh/keys/bob.pub < bcf/spec-v4.3.bcf > c4gh/spec-v4.3.bcf.c4gh
crypt4gh encrypt --sk c4gh/keys/alice.sec --recipient_pk c4gh/keys/bob.pub < cram/htsnexus_test_NA12878.cram > c4gh/htsnexus_test_NA12878.cram.c4gh
crypt4gh encrypt --sk c4gh/keys/alice.sec --recipient_pk c4gh/keys/bob.pub < vcf/sample1-bcbio-cancer.vcf.gz > c4gh/sample1-bcbio-cancer.vcf.gz.c4gh
crypt4gh encrypt --sk c4gh/keys/alice.sec --recipient_pk c4gh/keys/bob.pub < vcf/spec-v4.3.vcf.gz > c4gh/spec-v4.3.vcf.gz.c4gh