diff --git a/docs/Configuration.md b/docs/Configuration.md
index f90fe2749dd9..ae880b3b30e3 100644
--- a/docs/Configuration.md
+++ b/docs/Configuration.md
@@ -150,11 +150,6 @@ For example, the following would create a global `__DEV__` variable set to `true
 
 Note that, if you specify a global reference value (like an object or array) here, and some code mutates that value in the midst of running a test, that mutation will *not* be persisted across test runs for other test files.
 
-### `mocksPattern` [string]
-Default: `(?:[\\/]|^)__mocks__[\\/]`
-
-A pattern that is matched against file paths to determine which folder contains manual mocks.
-
 ### `moduleFileExtensions` [array<string>]
 Default: `["js", "json", "jsx", "node"]`
 
@@ -232,6 +227,15 @@ Oftentimes, you'll want to set this to `'src'` or `'lib'`, corresponding to wher
 
 *Note that using `'<rootDir>'` as a string token in any other path-based config settings will refer back to this value. So, for example, if you want your [`setupFiles`](#setupfiles-array) config entry to point at the `env-setup.js` file at the root of your project, you could set its value to `["<rootDir>/env-setup.js"]`.*
 
+### `roots` [array<string>]
+Default: `["<rootDir>"]`
+
+A list of paths to directories that Jest should use to search for files in.
+
+There are times where you only want Jest to search in a single sub-directory (such as cases where you have a `src/` directory in your repo), but prevent it from accessing the rest of the repo.
+
+*Note: While `rootDir` is mostly used as a token to be re-used in other configuration options, `roots` is used by the internals of Jest to locate **test files and source files**. By default, `roots` has a single entry `<rootDir>` but there are cases where you want to have multiple roots within one project, for example `roots: ["<rootDir>/src/", "<rootDir>/tests/"]`.*
+
 ### `setupFiles` [array]
 Default: `[]`
 
@@ -330,13 +334,6 @@ for details of the patterns you can specify.
 See also [`testRegex` [string]](#testregex-string), but note that you
 cannot specify both options.
 
-### `testPathDirs` [array<string>]
-Default: `["<rootDir>"]`
-
-A list of paths to directories that Jest should use to search for tests in.
-
-There are times where you only want Jest to search in a single sub-directory (such as cases where you have a `src/` directory in your repo), but not the rest of the repo.
-
 ### `testPathIgnorePatterns` [array<string>]
 Default: `["/node_modules/"]`
 
diff --git a/packages/jest-cli/src/SearchSource.js b/packages/jest-cli/src/SearchSource.js
index a7664ac625ec..4ce92db18b9a 100644
--- a/packages/jest-cli/src/SearchSource.js
+++ b/packages/jest-cli/src/SearchSource.js
@@ -28,8 +28,8 @@ const {
 } = require('jest-util');
 
 type SearchSourceConfig = {
+  roots: Array<Path>,
   testMatch: Array<Glob>,
-  testPathDirs: Array<Path>,
   testRegex: string,
   testPathIgnorePatterns: Array<string>,
 };
@@ -94,11 +94,11 @@ class SearchSource {
   _hasteContext: HasteContext;
   _config: SearchSourceConfig;
   _options: ResolveModuleConfig;
-  _testPathDirPattern: RegExp;
+  _rootPattern: RegExp;
   _testIgnorePattern: ?RegExp;
   _testPathCases: {
+    roots: (path: Path) => boolean,
     testMatch: (path: Path) => boolean,
-    testPathDirs: (path: Path) => boolean,
     testRegex: (path: Path) => boolean,
     testPathIgnorePatterns: (path: Path) => boolean,
   };
@@ -114,8 +114,8 @@ class SearchSource {
       skipNodeResolution: false,
     };
 
-    this._testPathDirPattern =
-      new RegExp(config.testPathDirs.map(
+    this._rootPattern =
+      new RegExp(config.roots.map(
         dir => escapePathForRegex(dir),
       ).join('|'));
 
@@ -124,8 +124,8 @@ class SearchSource {
       ignorePattern.length ? new RegExp(ignorePattern.join('|')) : null;
 
     this._testPathCases = {
+      roots: path => this._rootPattern.test(path),
       testMatch: globsToMatcher(config.testMatch),
-      testPathDirs: path => this._testPathDirPattern.test(path),
       testPathIgnorePatterns: path => (
         !this._testIgnorePattern ||
         !this._testIgnorePattern.test(path)
@@ -212,7 +212,7 @@ class SearchSource {
   }
 
   findChangedTests(options: Options): Promise<SearchResult> {
-    return Promise.all(this._config.testPathDirs.map(determineSCM))
+    return Promise.all(this._config.roots.map(determineSCM))
       .then(repos => {
         if (!repos.every(([gitRepo, hgRepo]) => gitRepo || hgRepo)) {
           return {
diff --git a/packages/jest-cli/src/__tests__/SearchSource-test.js b/packages/jest-cli/src/__tests__/SearchSource-test.js
index a85d256027d3..34c33db0fa3d 100644
--- a/packages/jest-cli/src/__tests__/SearchSource-test.js
+++ b/packages/jest-cli/src/__tests__/SearchSource-test.js
@@ -43,7 +43,7 @@ describe('SearchSource', () => {
       config = normalizeConfig({
         name,
         rootDir: '.',
-        testPathDirs: [],
+        roots: [],
       });
       Runtime.createHasteContext(config, {maxWorkers}).then(hasteMap => {
         searchSource = new SearchSource(hasteMap, config);
@@ -59,8 +59,8 @@ describe('SearchSource', () => {
         config = normalizeConfig({
           name,
           rootDir: '.',
+          roots: [],
           testMatch: null,
-          testPathDirs: [],
           testRegex: '(/__tests__/.*|(\\.|/)(test|spec))\\.jsx?$',
         });
         Runtime.createHasteContext(config, {maxWorkers}).then(hasteMap => {
diff --git a/packages/jest-cli/src/__tests__/watch-test.js b/packages/jest-cli/src/__tests__/watch-test.js
index 892cddf59f4a..6e232eb1afdc 100644
--- a/packages/jest-cli/src/__tests__/watch-test.js
+++ b/packages/jest-cli/src/__tests__/watch-test.js
@@ -44,7 +44,7 @@ describe('Watch mode flows', () => {
     hasteMap = {on: () => {}};
     argv = {};
     hasteContext = {};
-    config = {testPathDirs: [], testPathIgnorePatterns: [], testRegex: ''};
+    config = {roots: [], testPathIgnorePatterns: [], testRegex: ''};
     stdin = new MockStdin();
   });
 
@@ -99,7 +99,7 @@ describe('Watch mode flows', () => {
     stdin.emit(KEYS.U);
 
     expect(runJestMock.mock.calls[0][1]).toEqual({
-      testPathDirs: [],
+      roots: [],
       testPathIgnorePatterns: [],
       testRegex: '',
       updateSnapshot: true,
diff --git a/packages/jest-cli/src/lib/__tests__/logDebugMessages-test.js b/packages/jest-cli/src/lib/__tests__/logDebugMessages-test.js
index aa1a3eebbcf6..d0c796268769 100644
--- a/packages/jest-cli/src/lib/__tests__/logDebugMessages-test.js
+++ b/packages/jest-cli/src/lib/__tests__/logDebugMessages-test.js
@@ -34,7 +34,7 @@ describe('logDebugMessages', () => {
     logDebugMessages({
       automock: false,
       rootDir: '/path/to/dir',
-      testPathDirs: ['path/to/dir/test'],
+      roots: ['path/to/dir/test'],
       testRunner: 'myRunner',
       watch: true,
     }, pipe);
@@ -42,7 +42,7 @@ describe('logDebugMessages', () => {
       `config = {
   "automock": false,
   "rootDir": "/path/to/dir",
-  "testPathDirs": [
+  "roots": [
     "path/to/dir/test"
   ],
   "testRunner": "myRunner",
diff --git a/packages/jest-config/src/__tests__/normalize-test.js b/packages/jest-config/src/__tests__/normalize-test.js
index e7f24b418abf..2e5c5f3ed009 100644
--- a/packages/jest-config/src/__tests__/normalize-test.js
+++ b/packages/jest-config/src/__tests__/normalize-test.js
@@ -190,8 +190,8 @@ function testPathArray(key) {
   });
 }
 
-describe('testPathDirs', () => {
-  testPathArray('testPathDirs');
+describe('roots', () => {
+  testPathArray('roots');
 });
 
 describe('transform', () => {
diff --git a/packages/jest-config/src/defaults.js b/packages/jest-config/src/defaults.js
index 5985647540dd..26e58f8da909 100644
--- a/packages/jest-config/src/defaults.js
+++ b/packages/jest-config/src/defaults.js
@@ -31,7 +31,6 @@ module.exports = ({
   haste: {
     providesModuleNodeModules: [],
   },
-  mocksPattern: '__mocks__',
   moduleDirectories: ['node_modules'],
   moduleFileExtensions: [
     'js',
@@ -46,13 +45,13 @@ module.exports = ({
   preset: null,
   resetMocks: false,
   resetModules: false,
+  roots: ['<rootDir>'],
   snapshotSerializers: [],
   testEnvironment: 'jest-environment-jsdom',
   testMatch: [
     '**/__tests__/**/*.js?(x)',
     '**/?(*.)(spec|test).js?(x)',
   ],
-  testPathDirs: ['<rootDir>'],
   testPathIgnorePatterns: [NODE_MODULES_REGEXP],
   testRegex: '',
   testResultsProcessor: null,
diff --git a/packages/jest-config/src/deprecated.js b/packages/jest-config/src/deprecated.js
index 245fb09a6488..4a10133b245a 100644
--- a/packages/jest-config/src/deprecated.js
+++ b/packages/jest-config/src/deprecated.js
@@ -34,6 +34,17 @@ const deprecatedOptions = {
   }
 
   Please update your configuration.`,
+
+  testPathDirs: (config: Object) =>
+  `  Option ${chalk.bold('"testPathDirs"')} was replaced by ${chalk.bold('"roots"')}.
+
+  Jest now treats your current configuration as:
+  {
+    ${chalk.bold('"roots"')}: ${chalk.bold(format(config.testPathDirs))}
+  }
+
+  Please update your configuration.
+  `,
 };
 /* eslint-enable max-len */
 
diff --git a/packages/jest-config/src/normalize.js b/packages/jest-config/src/normalize.js
index 0c9fe1ede325..7bf8b4d23642 100644
--- a/packages/jest-config/src/normalize.js
+++ b/packages/jest-config/src/normalize.js
@@ -258,6 +258,9 @@ function normalize(config: InitialConfig, argv: Object = {}) {
   if (config.testEnvironment) {
     config.testEnvironment = getTestEnvironment(config);
   }
+  if (!config.roots && config.testPathDirs) {
+    config.roots = config.testPathDirs;
+  }
 
   const babelJest = setupBabelJest(config);
   const newConfig = Object.assign({}, DEFAULT_CONFIG);
@@ -273,7 +276,7 @@ function normalize(config: InitialConfig, argv: Object = {}) {
         //$FlowFixMe
         value = config[key].map(resolve.bind(null, config.rootDir, key));
         break;
-      case 'testPathDirs':
+      case 'roots':
         //$FlowFixMe
         value = config[key].map(filePath => path.resolve(
           config.rootDir,
@@ -331,7 +334,6 @@ function normalize(config: InitialConfig, argv: Object = {}) {
       case 'haste':
       case 'logHeapUsage':
       case 'logTransformErrors':
-      case 'mocksPattern':
       case 'moduleDirectories':
       case 'moduleFileExtensions':
       case 'moduleLoader':
diff --git a/packages/jest-config/src/validConfig.js b/packages/jest-config/src/validConfig.js
index 3a62fc23cfae..fd04cac9cd8f 100644
--- a/packages/jest-config/src/validConfig.js
+++ b/packages/jest-config/src/validConfig.js
@@ -44,7 +44,6 @@ module.exports = ({
   },
   logHeapUsage: true,
   logTransformErrors: true,
-  mocksPattern: '__mocks__',
   moduleDirectories: ['node_modules'],
   moduleFileExtensions: ['js', 'json', 'jsx', 'node'],
   moduleLoader: '<rootDir>',
@@ -60,6 +59,7 @@ module.exports = ({
   resetMocks: false,
   resetModules: false,
   rootDir: '/',
+  roots: ['<rootDir>'],
   setupFiles: ['<rootDir>/setup.js'],
   setupTestFrameworkScriptFile: '<rootDir>/testSetupFile.js',
   silent: true,
@@ -67,7 +67,6 @@ module.exports = ({
   testEnvironment: 'jest-environment-jsdom',
   testMatch: ['**/__tests__/**/*.js?(x)', '**/?(*.)(spec|test).js?(x)'],
   testNamePattern: 'test signature',
-  testPathDirs: ['<rootDir>'],
   testPathIgnorePatterns: [NODE_MODULES_REGEXP],
   testRegex: '(/__tests__/.*|(\\.|/)(test|spec))\\.jsx?$',
   testResultsProcessor: 'processor-node-module',
diff --git a/packages/jest-editor-support/src/parsers/BabylonParser.js b/packages/jest-editor-support/src/parsers/BabylonParser.js
index 1eb2417ef224..9d934e641b6e 100644
--- a/packages/jest-editor-support/src/parsers/BabylonParser.js
+++ b/packages/jest-editor-support/src/parsers/BabylonParser.js
@@ -51,7 +51,9 @@ const babylonParser = (file: string) => {
   const babelRC = getBabelRC(file, {useCache: true});
   const babel = JSON.parse(babelRC);
 
-  const plugins = Array.isArray(babel.plugins) ? babel.plugins.concat(['flow']) : ['flow'];
+  const plugins = Array.isArray(babel.plugins)
+    ? babel.plugins.concat(['flow'])
+    : ['flow'];
   const config = {plugins, sourceType: 'module'};
   const ast = babylon.parse(data, config);
 
@@ -63,7 +65,7 @@ const babylonParser = (file: string) => {
     block.name = node.expression.arguments[0].value;
     block.start = node.loc.start;
     block.end =  node.loc.end;
-    
+
     block.start.column += 1;
 
     block.file = file;
@@ -72,7 +74,7 @@ const babylonParser = (file: string) => {
 
   // An `expect` was found in the AST
   // So take the AST node and create an object for us
-  // to store for later usage 
+  // to store for later usage
   const foundExpectNode = (node: any, file: string) => {
     const expect = new Expect();
     expect.start = node.loc.start;
@@ -147,7 +149,7 @@ const babylonParser = (file: string) => {
       if (!root.body.hasOwnProperty(node)) {
         return;
       }
-        
+
       // Pull out the node
       const element = root.body[node];
 
@@ -173,7 +175,7 @@ const babylonParser = (file: string) => {
           .filter(argument => isFunctionDeclaration(argument.type))
           .forEach(argument => searchNodes(argument.body, file));
       }
-      
+
       if (isFunctionCall(element)) {
         element.expression.arguments
           .filter(argument => isFunctionDeclaration(argument.type))
diff --git a/packages/jest-haste-map/src/getMockName.js b/packages/jest-haste-map/src/getMockName.js
index 8c83081da98d..c064d9b91341 100644
--- a/packages/jest-haste-map/src/getMockName.js
+++ b/packages/jest-haste-map/src/getMockName.js
@@ -11,11 +11,11 @@
 
 const path = require('path');
 
-const mocksPattern = '__mocks__';
+const MOCKS_PATTERN = path.sep + '__mocks__' + path.sep;
 
 const getMockName = (filePath: string) => {
-  const mockPath = filePath.split(mocksPattern)[1];
-  return mockPath.substring(1, mockPath.lastIndexOf(path.extname(mockPath)));
+  const mockPath = filePath.split(MOCKS_PATTERN)[1];
+  return mockPath.substring(0, mockPath.lastIndexOf(path.extname(mockPath)));
 };
 
 module.exports = getMockName;
diff --git a/packages/jest-runtime/src/__tests__/transform-test.js b/packages/jest-runtime/src/__tests__/transform-test.js
index b7d41907ec97..3b8c94dd065f 100644
--- a/packages/jest-runtime/src/__tests__/transform-test.js
+++ b/packages/jest-runtime/src/__tests__/transform-test.js
@@ -14,7 +14,11 @@ const skipOnWindows = require('skipOnWindows');
 jest
   .mock('graceful-fs')
   .mock('jest-file-exists')
-  .mock('jest-util')
+  .mock('jest-util', () => {
+    const util = require.requireActual('jest-util');
+    util.createDirectory = jest.fn();
+    return util;
+  })
   .mock('vm');
 
 jest.mock(
diff --git a/packages/jest-runtime/src/index.js b/packages/jest-runtime/src/index.js
index 29dc52d0af77..5e679e2a44c9 100644
--- a/packages/jest-runtime/src/index.js
+++ b/packages/jest-runtime/src/index.js
@@ -27,6 +27,7 @@ const shouldInstrument = require('./shouldInstrument');
 const transform = require('./transform');
 const {
   createDirectory,
+  escapePathForRegex,
 } = require('jest-util');
 
 type Module = {|
@@ -81,7 +82,6 @@ class Runtime {
   _mockFactories: {[key: string]: () => any};
   _mockMetaDataCache: {[key: string]: MockFunctionMetadata};
   _mockRegistry: {[key: string]: any};
-  _mocksPattern: ?RegExp;
   _moduleMocker: ModuleMocker;
   _moduleRegistry: {[key: string]: Module};
   _internalModuleRegistry: {[key: string]: Module};
@@ -110,8 +110,6 @@ class Runtime {
     this._explicitShouldMock = Object.create(null);
     this._isCurrentlyExecutingManualMock = null;
     this._mockFactories = Object.create(null);
-    this._mocksPattern =
-      config.mocksPattern ? new RegExp(config.mocksPattern) : null;
     this._shouldAutoMock = config.automock;
     this._virtualMocks = Object.create(null);
 
@@ -204,13 +202,13 @@ class Runtime {
       extensions: [SNAPSHOT_EXTENSION].concat(config.moduleFileExtensions),
       ignorePattern,
       maxWorkers: (options && options.maxWorkers) || 1,
-      mocksPattern: config.mocksPattern,
+      mocksPattern: escapePathForRegex(path.sep + '__mocks__' + path.sep),
       name: config.name,
       platforms: config.haste.platforms || ['ios', 'android'],
       providesModuleNodeModules: config.haste.providesModuleNodeModules,
       resetCache: options && options.resetCache,
       retainAllFiles: false,
-      roots: config.testPathDirs,
+      roots: config.roots,
       useWatchman: config.watchman,
       watch: options && options.watch,
     });
diff --git a/packages/jest-runtime/src/shouldInstrument.js b/packages/jest-runtime/src/shouldInstrument.js
index 228d4e14756a..c4d3998cd6df 100644
--- a/packages/jest-runtime/src/shouldInstrument.js
+++ b/packages/jest-runtime/src/shouldInstrument.js
@@ -11,9 +11,13 @@
 
 import type {Config, Path} from 'types/Config';
 
+const {escapePathForRegex} = require('jest-util');
 const micromatch = require('micromatch');
 const path = require('path');
 
+const MOCKS_PATTERN =
+  new RegExp(escapePathForRegex(path.sep + '__mocks__' + path.sep));
+
 const shouldInstrument = (filename: Path, config: Config): boolean => {
   if (!config.collectCoverage) {
     return false;
@@ -58,7 +62,7 @@ const shouldInstrument = (filename: Path, config: Config): boolean => {
     return false;
   }
 
-  if (config.mocksPattern && filename.match(config.mocksPattern)) {
+  if (MOCKS_PATTERN.test(filename)) {
     return false;
   }
 
diff --git a/packages/jest-runtime/src/transform.js b/packages/jest-runtime/src/transform.js
index 1c52d9819650..7ecc0ae918ae 100644
--- a/packages/jest-runtime/src/transform.js
+++ b/packages/jest-runtime/src/transform.js
@@ -57,12 +57,11 @@ const getCacheKey = (
       collectCoverageOnlyFrom: config.collectCoverageOnlyFrom,
       coveragePathIgnorePatterns: config.coveragePathIgnorePatterns,
       haste: config.haste,
-      mocksPattern: config.mocksPattern,
       moduleFileExtensions: config.moduleFileExtensions,
       moduleNameMapper: config.moduleNameMapper,
       rootDir: config.rootDir,
+      roots: config.roots,
       testMatch: config.testMatch,
-      testPathDirs: config.testPathDirs,
       testRegex: config.testRegex,
       transformIgnorePatterns: config.transformIgnorePatterns,
     }));
diff --git a/packages/jest-validate/src/__tests__/fixtures/jestConfig.js b/packages/jest-validate/src/__tests__/fixtures/jestConfig.js
index 667e2ca5c6ff..92c636023393 100644
--- a/packages/jest-validate/src/__tests__/fixtures/jestConfig.js
+++ b/packages/jest-validate/src/__tests__/fixtures/jestConfig.js
@@ -35,7 +35,6 @@ const defaultConfig = {
   haste: {
     providesModuleNodeModules: [],
   },
-  mocksPattern: '__mocks__',
   moduleDirectories: ['node_modules'],
   moduleFileExtensions: [
     'js',
@@ -50,9 +49,9 @@ const defaultConfig = {
   preset: null,
   resetMocks: false,
   resetModules: false,
+  roots: ['<rootDir>'],
   snapshotSerializers: [],
   testEnvironment: 'jest-environment-jsdom',
-  testPathDirs: ['<rootDir>'],
   testPathIgnorePatterns: [NODE_MODULES_REGEXP],
   testRegex: '(/__tests__/.*|(\\.|/)(test|spec))\\.jsx?$',
   testResultsProcessor: null,
@@ -91,7 +90,6 @@ const validConfig = {
   },
   logHeapUsage: true,
   logTransformErrors: true,
-  mocksPattern: '__mocks__',
   moduleDirectories: ['node_modules'],
   moduleFileExtensions: ['js', 'json', 'jsx', 'node'],
   moduleLoader: '<rootDir>',
@@ -107,13 +105,13 @@ const validConfig = {
   resetMocks: false,
   resetModules: false,
   rootDir: '/',
+  roots: ['<rootDir>'],
   setupFiles: ['<rootDir>/setup.js'],
   setupTestFrameworkScriptFile: '<rootDir>/testSetupFile.js',
   silent: true,
   snapshotSerializers: ['my-serializer-module'],
   testEnvironment: 'jest-environment-jsdom',
   testNamePattern: 'test signature',
-  testPathDirs: ['<rootDir>'],
   testPathIgnorePatterns: [NODE_MODULES_REGEXP],
   testRegex: '(/__tests__/.*|(\\.|/)(test|spec))\\.jsx?$',
   testResultsProcessor: 'processor-node-module',
diff --git a/types/Config.js b/types/Config.js
index 26e05a41adf9..ebaa9643c4f9 100644
--- a/types/Config.js
+++ b/types/Config.js
@@ -30,7 +30,6 @@ export type DefaultConfig = {|
   expand: boolean,
   globals: ConfigGlobals,
   haste: HasteConfig,
-  mocksPattern: string,
   moduleDirectories: Array<string>,
   moduleFileExtensions: Array<string>,
   moduleNameMapper: {[key: string]: string},
@@ -40,10 +39,10 @@ export type DefaultConfig = {|
   preset: ?string,
   resetMocks: boolean,
   resetModules: boolean,
+  roots: Array<Path>,
   snapshotSerializers: Array<Path>,
   testEnvironment: string,
   testMatch: Array<Glob>,
-  testPathDirs: Array<Path>,
   testPathIgnorePatterns: Array<string>,
   testRegex: string,
   testResultsProcessor: ?string,
@@ -74,7 +73,6 @@ export type Config = {|
   haste: HasteConfig,
   logHeapUsage: boolean,
   logTransformErrors: ?boolean,
-  mocksPattern: string,
   moduleDirectories: Array<string>,
   moduleFileExtensions: Array<string>,
   moduleLoader: Path,
@@ -89,6 +87,7 @@ export type Config = {|
   resetMocks: boolean,
   resetModules: boolean,
   rootDir: Path,
+  roots: Array<Path>,
   setupFiles: Array<Path>,
   setupTestFrameworkScriptFile: Path,
   silent: boolean,
@@ -96,7 +95,6 @@ export type Config = {|
   testEnvironment: string,
   testMatch: Array<Glob>,
   testNamePattern: string,
-  testPathDirs: Array<Path>,
   testPathIgnorePatterns: Array<string>,
   testRegex: string,
   testResultsProcessor: ?string,
@@ -132,7 +130,6 @@ export type InitialConfig = {|
   haste?: HasteConfig,
   logHeapUsage?: boolean,
   logTransformErrors?: ?boolean,
-  mocksPattern?: string,
   moduleDirectories?: Array<string>,
   moduleFileExtensions?: Array<string>,
   moduleLoader?: Path,
@@ -148,6 +145,7 @@ export type InitialConfig = {|
   resetMocks?: boolean,
   resetModules?: boolean,
   rootDir: Path,
+  roots?: Array<Path>,
   scriptPreprocessor?: string,
   setupFiles?: Array<Path>,
   setupTestFrameworkScriptFile?: Path,
@@ -156,7 +154,6 @@ export type InitialConfig = {|
   testEnvironment?: string,
   testMatch?: Array<Glob>,
   testNamePattern?: string,
-  testPathDirs?: Array<Path>,
   testPathIgnorePatterns?: Array<string>,
   testRegex?: string,
   testResultsProcessor?: ?string,