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Panzer: Random Test Failures During PR Testing #10412

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csiefer2 opened this issue Apr 6, 2022 · 4 comments
Closed

Panzer: Random Test Failures During PR Testing #10412

csiefer2 opened this issue Apr 6, 2022 · 4 comments
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CLOSED_DUE_TO_INACTIVITY Issue or PR has been closed by the GitHub Actions bot due to inactivity. MARKED_FOR_CLOSURE Issue or PR is marked for auto-closure by the GitHub Actions bot. type: bug The primary issue is a bug in Trilinos code or tests

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@csiefer2
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csiefer2 commented Apr 6, 2022

This guy:

PanzerAdaptersSTK_PoissonInterfaceTpetra_2d_diffsideids_MPI_1

Example:
https://testing.sandia.gov/cdash/viewTest.php?onlyfailed&buildid=10809863

@csiefer2 csiefer2 added the type: bug The primary issue is a bug in Trilinos code or tests label Apr 6, 2022
@rppawlo
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rppawlo commented Apr 6, 2022

@gsjaardema - This looks like ioss is throwing an exception. This test exercises an internal sideset. Has anything changed in sideset handling recently?

IOSS WARNING: No nodes were found in the model, file 'diffsideids.exo'

IOSS WARNING: No elements were found in the model, file 'diffsideids.exo'
PanzerAdaptersSTK_PoissonInterfaceTpetra.exe: /scratch/trilinos/jenkins/ascic166/workspace/trilinos-folder/Trilinos_pullrequest_gcc_7.2.0_debug/Trilinos/packages/seacas/libraries/ioss/src/Ioss_NodeBlock.C:33: Ioss::NodeBlock::NodeBlock(Ioss::DatabaseIO*, const string&, int64_t, int64_t): Assertion `degrees_of_freedom == 1 || degrees_of_freedom == 2 || degrees_of_freedom == 3' failed.
[ascic166:27492] *** Process received signal ***
[ascic166:27492] Signal: Aborted (6)
[ascic166:27492] Signal code:  (-6)
[ascic166:27492] [ 0] /lib64/libpthread.so.0(+0xf630)[0x7fa55b724630]
[ascic166:27492] [ 1] /lib64/libc.so.6(gsignal+0x37)[0x7fa55b37d387]
[ascic166:27492] [ 2] /lib64/libc.so.6(abort+0x148)[0x7fa55b37ea78]
[ascic166:27492] [ 3] /lib64/libc.so.6(+0x2f1a6)[0x7fa55b3761a6]
[ascic166:27492] [ 4] /lib64/libc.so.6(+0x2f252)[0x7fa55b376252]
[ascic166:27492] [ 5] /scratch/trilinos/jenkins/ascic166/workspace/trilinos-folder/Trilinos_pullrequest_gcc_7.2.0_debug/pull_request_test/packages/seacas/libraries/ioss/src/libIoss.so.13(_ZN4Ioss9NodeBlockC1EPNS_10DatabaseIOERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEll+0x1ad)[0x7fa576031e83]
[ascic166:27492] [ 6] /scratch/trilinos/jenkins/ascic166/workspace/trilinos-folder/Trilinos_pullrequest_gcc_7.2.0_debug/pull_request_test/packages/seacas/libraries/ioss/src/exodus/libIoex.so.13(_ZN4Ioex14BaseDatabaseIO14get_nodeblocksEv+0x97)[0x7fa57652e4db]
[ascic166:27492] [ 7] /scratch/trilinos/jenkins/ascic166/workspace/trilinos-folder/Trilinos_pullrequest_gcc_7.2.0_debug/pull_request_test/packages/seacas/libraries/ioss/src/exodus/libIoex.so.13(_ZN4Ioex10DatabaseIO16read_meta_data__Ev+0x46f)[0x7fa5765906c3]
[ascic166:27492] [ 8] /scratch/trilinos/jenkins/ascic166/workspace/trilinos-folder/Trilinos_pullrequest_gcc_7.2.0_debug/pull_request_test/packages/seacas/libraries/ioss/src/libIoss.so.13(_ZN4Ioss10DatabaseIO14read_meta_dataEv+0x74)[0x7fa57606889a]
[ascic166:27492] [ 9] /scratch/trilinos/jenkins/ascic166/workspace/trilinos-folder/Trilinos_pullrequest_gcc_7.2.0_debug/pull_request_test/packages/seacas/libraries/ioss/src/libIoss.so.13(_ZN4Ioss6RegionC2EPNS_10DatabaseIOERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE+0x2a7)[0x7fa57604bc5b]
[ascic166:27492] [10] /scratch/trilinos/jenkins/ascic166/workspace/trilinos-folder/Trilinos_pullrequest_gcc_7.2.0_debug/pull_request_test/packages/stk/stk_io/stk_io/libstk_io.so.13(_ZN3stk2io9InputFile18create_ioss_regionEv+0x203)[0x7fa578203a7f]
[ascic166:27492] [11] /scratch/trilinos/jenkins/ascic166/workspace/trilinos-folder/Trilinos_pullrequest_gcc_7.2.0_debug/pull_request_test/packages/stk/stk_io/stk_io/libstk_io.so.13(_ZN3stk2io9InputFile19get_input_io_regionEv+0x57)[0x7fa578297b99]
[ascic166:27492] [12] /scratch/trilinos/jenkins/ascic166/workspace/trilinos-folder/Trilinos_pullrequest_gcc_7.2.0_debug/pull_request_test/packages/stk/stk_io/stk_io/libstk_io.so.13(_ZN3stk2io15StkMeshIoBroker17create_input_meshEv+0x79)[0x7fa57828f449]
[ascic166:27492] [13] /scratch/trilinos/jenkins/ascic166/workspace/trilinos-folder/Trilinos_pullrequest_gcc_7.2.0_debug/pull_request_test/packages/panzer/adapters-stk/src/libpanzer-stk.so.13(_ZNK10panzer_stk23STK_ExodusReaderFactory19buildUncommitedMeshEP19ompi_communicator_t+0x301)[0x7fa598cd549f]
[ascic166:27492] [14] /scratch/trilinos/jenkins/ascic166/workspace/trilinos-folder/Trilinos_pullrequest_gcc_7.2.0_debug/pull_request_test/packages/panzer/adapters-stk/example/PoissonInterfaceTpetra/PanzerAdaptersSTK_PoissonInterfaceTpetra.exe[0x67bd2c]
[ascic166:27492] [15] /lib64/libc.so.6(__libc_start_main+0xf5)[0x7fa55b369555]
[ascic166:27492] [16] /scratch/trilinos/jenkins/ascic166/workspace/trilinos-folder/Trilinos_pullrequest_gcc_7.2.0_debug/pull_request_test/packages/panzer/adapters-stk/example/PoissonInterfaceTpetra/PanzerAdaptersSTK_PoissonInterfaceTpetra.exe[0x676ab9]
[ascic166:27492] *** End of error message ***
--------------------------------------------------------------------------
mpiexec noticed that process rank 0 with PID 27492 on node ascic166 exited on signal 6 (Aborted).
--------------------------------------------------------------------------

@alanw0
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alanw0 commented Apr 6, 2022

We haven't done a stk update recently, but I'm going to tag Tolu here also: @tokusanya

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github-actions bot commented Apr 8, 2023

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@github-actions github-actions bot added the MARKED_FOR_CLOSURE Issue or PR is marked for auto-closure by the GitHub Actions bot. label Apr 8, 2023
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This issue was closed due to inactivity for 395 days.

@github-actions github-actions bot added the CLOSED_DUE_TO_INACTIVITY Issue or PR has been closed by the GitHub Actions bot due to inactivity. label May 10, 2023
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CLOSED_DUE_TO_INACTIVITY Issue or PR has been closed by the GitHub Actions bot due to inactivity. MARKED_FOR_CLOSURE Issue or PR is marked for auto-closure by the GitHub Actions bot. type: bug The primary issue is a bug in Trilinos code or tests
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