DESCRIPTION

Package: Gimpute
Type: Package
Title: Gimpute: An efficient genetic data processing and imputation pipeline
Version: 1.2
Date: 2020-09-10 
Authors@R: c(person("Junfang", "Chen", role=c("aut", "cre", "cph"), email="junfang.che33@gmail.com"),
    person("Dietmar", "Lippold", role=c("aut")),
    person("Emanuel", "Schwarz", role=c("aut")))
Author: Junfang Chen, Dietmar Lippold, Emanuel Schwarz
Maintainer: Junfang Chen <junfang.chen33@gmail.com>    
Description: Genotype imputation is essential for genome-wide association studies 
    (GWAS) to retrieve information of untyped variants and facilitate comparability 
    across studies. Based on widely used and freely available tools, 
    we have developed Gimpute, an automated processing and imputation pipeline 
    for genome-wide association data. Gimpute includes processing steps for 
    genotype liftOver, quality control, population outlier detection, 
    haplotype pre-phasing, imputation, post imputation, data management 
    and the extension to other existing pipeline. 
License: GPL-3
Imports:
    doParallel, lattice, grDevices, utils
Depends: R (>= 3.5.0)
Suggests: BiocStyle, knitr 
VignetteBuilder: knitr
biocViews: Genetics, GenomicVariation, SNP, GenomeWideAssociation, QualityControl, VariantDetection, Alignment
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.1