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Interests about python implementation #43

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HelloWorldLTY opened this issue Apr 16, 2024 · 6 comments
Open

Interests about python implementation #43

HelloWorldLTY opened this issue Apr 16, 2024 · 6 comments

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@HelloWorldLTY
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Hi, thanks for your great work. Considering many single-cell methods are developed also in python, I wonder if you have plan to extend your design to Python platform. Thanks a lot.

@tpq
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tpq commented Apr 16, 2024

Thanks for your interest in propr.

Unfortunately I do not have the capacity to migrate this library into Python and to maintain two separate instances of the software. Given the number of features bundled into propr, I think migration would be a significant undertaking.

However, there are pieces of propr that could be implemented in Python quite easily -- depending on which parts of the software you want to use. If you let me know what feature(s) is most useful to you, I may be able to advise on how you could lift the code into an equivalent numpy calculation.

@HelloWorldLTY
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I see, thanks a lot. I have implemented propr by myself. Thx.

@SilasK
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SilasK commented Jun 3, 2024

@HelloWorldLTY I would be interested.

@suzannejin
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@HelloWorldLTY @SilasK Have you managed to do that?

@HelloWorldLTY
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Hi, I used to implement one python version, I can upload the code later. Thanks for your interests.

@HelloWorldLTY
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Could you please try this implementation:

https://github.com/HelloWorldLTY/propr_python/tree/main

And share your questions or experiences with me? Thanks.

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4 participants