glossary.tex

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% glossary %
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% programming languages
\newglossaryentry{COBOL}{name={COBOL},description={business-oriented programming language}}
\newglossaryentry{Fortran}{name={Fortran},description={general-purpose compiled programming language}}
\newglossaryentry{Cpp}{name={C++},description={general-purpose compiled programming language}}
\newglossaryentry{C}{name={C},description={general-purpose compiled programming language}}
\newglossaryentry{R}{name={R},description={general-purpose scripting language}}
\newglossaryentry{Python}{name={Python},description={general-purpose scripting language}}

% platforms, services, companies
\newglossaryentry{GitHub}{name={GitHub},description={online software repository hosting and collaboration platform}}
\newglossaryentry{GitLab}{name={GitLab},description={online software repository hosting and collaboration platform}}

% software engineering
\newglossaryentry{design-pattern}{name={design pattern},description={general and reusable solution to solve a \ac{SE} problem (often a best practice, or a ``recipe'')}}
\newglossaryentry{static-analysis}{name={static analysis},description={automated procedure to detect software bugs in source code without executing the code}}

% other
\newglossaryentry{SysOp}{name={SysOp},description={system administrator in charge of a computing infrastructure}}
\newglossaryentry{DevOps}{name={DevOps},description={set of practices and tools for code development and computing infrastructure maintenance}}
\newglossaryentry{software-publication}{name={software publication},description={the practice of long-term archiving software artifacts with software metadata under a permanent identifier}}

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% acronyms %
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% organisations and institutions
\newacronym{EMBL-EBI}{EMBL-EBI}{European Molecular Biology Laboratory - European Bioinformatics Institute}
\newacronym{EuroHPC-JU}{EuroHPC JU}{European High-Performance Computing Joint Undertaking}
\newacronym{UNESCO}{UNESCO}{United Nations Educational, Scientific and Cultural Organization}
\newacronym{MIT}{MIT}{Massachusetts Institute of Technology}
\newacronym{ISCB}{ISCB}{International Society for Computational Biology}
\newacronym{ENCCS}{ENCCS}{EuroCC National Competence Center Sweden}
\newacronym{PRACE}{PRACE}{Partnership for Advanced Computing in Europe}
\newacronym[first={German Research Foundation (DFG, Deutsche Forschungsgemeinschaft)}]{DFG}{DFG}{German Research Foundation (Deutsche Forschungsgemeinschaft)}
\newacronym[first={National Research Data Infrastructure (NFDI, Nationale Forschungsdateninfrastruktur)}]{NFDI}{NFDI}{National Research Data Infrastructure (Nationale Forschungsdateninfrastruktur)}
\newacronym{UNIVERSE-HPC}{UNIVERSE-HPC}{Understanding and Nurturing an Integrated Vision for Education in RSE and \glsentrytext{HPC}}

% other acronyms
\newacronym[plural=IDEs,firstplural=integrated development environments (IDE)]{IDE}{IDE}{integrated development environment}
\newacronym[plural=KPIs,firstplural=key performance indicators (KPIs)]{KPI}{KPI}{key performance indicator}
\newacronym[plural=LLMs,firstplural={large language models (LLMs)}]{LLM}{LLM}{large language model}
\newacronym{UML}{UML}{Unified Modelling Language}
\newacronym{HPC}{HPC}{High-Performance Computing}
\newacronym{HTC}{HTC}{High-Throughput Computing}
\newacronym{STEM}{STEM}{science, technology, engineering and mathematics}
\newacronym{SE}{SE}{software engineering}
\newacronym{FAIR}{FAIR}{Findability, Accessibility, Interoperability and Reusability}
\newacronym{IT}{IT}{information technology}
\newacronym{ML}{ML}{machine learning}
\newacronym{GPL}{GPL}{General Public License}
\newacronym{CI}{CI}{continuous integration}
\newacronym{CD}{CD}{continuous delivery}
\newacronym{CICD}{CI/CD}{continuous integration and continuous delivery}
\newacronym{RDM}{RDM}{research data management}
\newacronym{GDPR}{GDPR}{General Data Protection Regulation}
\newacronym{PI}{PI}{Principal Investigator}
\newacronym{TDD}{TDD}{test-driven development}
\newacronym{HIFIS}{HIFIS}{Helmholtz Federated IT Services}
\newacronym{DMP}{DMP}{data management plan}
\newacronym{EU}{EU}{European Union}
\newacronym{UK}{UK}{United Kingdom}
\newacronym{GREENER}{GREENER}{Governance, Responsibility, Estimation, Energy and embodied impacts, New collaborations, Education and Research}