From 7c5b4d8244bda4295d4b8d98c1601196ffa1a61c Mon Sep 17 00:00:00 2001 From: stemangiola Date: Thu, 16 Feb 2023 13:47:47 +1100 Subject: [PATCH] typo --- README.Rmd | 2 +- README.md | 26 +++++++++++++------------- vignettes/Introduction.Rmd | 2 +- 3 files changed, 15 insertions(+), 15 deletions(-) diff --git a/README.Rmd b/README.Rmd index e73ca07..eb2441c 100644 --- a/README.Rmd +++ b/README.Rmd @@ -140,7 +140,7 @@ single_cell_counts ### Extract the counts as a Seurat object -This convert the H5 SingleCellExperiment to Seurat so it might take long time and occupy a lot of memory dependeing on how many cells you are requesting. +This convert the H5 SingleCellExperiment to Seurat so it might take long time and occupy a lot of memory depending on how many cells you are requesting. ```{r} diff --git a/README.md b/README.md index 8c98971..ee34ea4 100644 --- a/README.md +++ b/README.md @@ -69,18 +69,18 @@ get_metadata() |> dplyr::distinct(tissue, file_id) #> # Source: SQL [?? x 2] #> # Database: DuckDB 0.6.2-dev1166 [unknown@Linux 3.10.0-1160.81.1.el7.x86_64:R 4.2.0/:memory:] -#> tissue file_id -#> -#> 1 epithelial cell of alveolus of lung (cell culture) 0e8f9ce4-46e5-434e-9ca0-e… -#> 2 peripheral zone of prostate 0f017e66-9c70-4d29-9435-2… -#> 3 transition zone of prostate 0f017e66-9c70-4d29-9435-2… -#> 4 superior frontal gyrus 0fe32cca-d111-42b6-9b93-b… -#> 5 fovea centralis 100c44ed-f754-4d45-8649-d… -#> 6 blood 1042ba0a-98c5-4816-897d-e… -#> 7 telencephalon 3fe53a40-38ff-4f25-b33b-e… -#> 8 kidney 69b67eef-43fd-40ff-8fd3-e… -#> 9 blood 6a044711-8df7-4f88-bad7-f… -#> 10 heart left ventricle 6a579758-a4b4-4f64-be54-4… +#> tissue file_id +#> +#> 1 cortex of kidney 2977b3fa-e4d6-4929-8540-ae12d33a3c53 +#> 2 entorhinal cortex 29d5d028-6f90-4943-91f7-fa3f93731de8 +#> 3 middle temporal gyrus 2a689fda-d335-4ac0-81b1-a356fdf939db +#> 4 respiratory airway 2c2d5bea-8be7-4227-8a56-f2a85d57fa56 +#> 5 thymus 2ec94470-8171-4825-8346-34d77383438b +#> 6 ileum 2f893c30-c91b-487b-b1f8-b386a4ef91a3 +#> 7 cortex of kidney 2fe625b6-8c85-4818-a9c5-1189303f6e2b +#> 8 fimbria of uterine tube 3044b5dd-a499-456e-86d9-94769bc3b63e +#> 9 ampulla of uterine tube 3044b5dd-a499-456e-86d9-94769bc3b63e +#> 10 temporal cortex 4e4bbb2d-f341-4523-a5a0-5407d8b03e0e #> # … with more rows ``` @@ -211,7 +211,7 @@ single_cell_counts ### Extract the counts as a Seurat object This convert the H5 SingleCellExperiment to Seurat so it might take long -time and occupy a lot of memory dependeing on how many cells you are +time and occupy a lot of memory depending on how many cells you are requesting. ``` r diff --git a/vignettes/Introduction.Rmd b/vignettes/Introduction.Rmd index 83a8ac0..feefda1 100644 --- a/vignettes/Introduction.Rmd +++ b/vignettes/Introduction.Rmd @@ -143,7 +143,7 @@ single_cell_counts ### Extract the counts as a Seurat object -This convert the H5 SingleCellExperiment to Seurat so it might take long time and occupy a lot of memory dependeing on how many cells you are requesting. +This convert the H5 SingleCellExperiment to Seurat so it might take long time and occupy a lot of memory depending on how many cells you are requesting. ```{r}