DESCRIPTION

Package: msqrobsum
Title: Robust differential abundance analysis for label-free quantitative proteomics and robust peptide abundance summarization
Version: 0.0.0.9000
Authors@R: person("Adriaan", "Sticker", email = "adriaan.sticker@ugent.be", role = c("aut", "cre"))
Description: Perform robust differential abundance analysis directly on peptide abundances from label-free quantitative proteomics experiment. Or first do a robust summarization on these peptide abundances to protein abundances and perform a robust differential abundance analysis on these summarized protein abundances.
Depends: R (>= 3.5.2)
Imports:
  MASS (>= 7.3.51.1),
  dplyr (>= 0.7.8),
  tidyr (>= 0.8.2),
  purrr (>= 0.2.5),
  future.apply (>= 1.1.0),
  lme4 (>= 1.1-20),
  limma (>= 3.36.5)
Suggests:
  Biobase (>= 2.40.0)
License: Apache License, Version 2.0
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.1