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Papers for Fusion dectection

  1. Creason, A., Haan, D., Dang, K., Chiotti, K. E., Inkman, M., Lamb, A., ... & Ellrott, K. (2021). A community challenge to evaluate RNA-seq, fusion detection, and isoform quantification methods for cancer discovery. Cell Systems. https://www.sciencedirect.com/science/article/pii/S2405471221002076

  2. Arriba https://github.com/suhrig/arriba https://arriba.readthedocs.io/en/latest/quickstart/

  3. STAR-Fusion https://www.biorxiv.org/content/10.1101/120295v1 https://github.com/STAR-Fusion/STAR-Fusion

Accurate and efficient detection of gene fusions from RNA sequencing data https://genome.cshlp.org/content/31/3/448.full