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<!DOCTYPE html>
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<head>
<title>Jon Sporring</title>
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<body>
<nav>
<ul>
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<li><a href="/">Home</a></li>
<li><a href="/about">About</a></li>
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<li><a href="https://di.ku.dk/english/staff/vip/?pure=en/persons/45217">My UCPH Homepage</a></li>
<li><a
href="https://researchprofiles.ku.dk/en/persons/jon-sporring/publications/">Publications</a>
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<li><a href="/Teaching">Teaching</a></li>
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<li><a href="CV_Jon_Sporring.pdf">CV</a></li>
<li><a href="https://github.com/sporring/matlab">Matlab Repository</a></li>
<li><a href="http://scholar.google.com/citations?user=COP1HUwAAAAJ">Google Scholar</a></li>
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<div class="blurb">
<p><img src="images/sporring.jpeg" style="height: 180px; margin: 0px 00px 100px 0px; border-radius: 10px;"
align="right" alt="Image of Me"> </p>
<h1>Jon Sporring</h1>
Professor, Ph.D.
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<td>Address:</td>
<td>University of Copenhagen</td>
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<tr>
<td></td>
<td>Department of Computer Science</td>
</tr>
<tr>
<td></td>
<td>Universitetsparken 1</td>
</tr>
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<td></td>
<td>2100 København Ø</td>
</tr>
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<td>Office:</td>
<td>3.2.20</td>
</tr>
<tr>
<td>Email:</td>
<td><a href="mailto:[email protected]">[email protected]</a></td>
</tr>
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<td>Phone:</td>
<td>(+45) 2448 2894</td>
</tr>
<tr>
<td>Skype:</td>
<td>jon_sporring</td>
</tr>
<tr>
<td>Github:</td>
<td><a href="https://github.com/sporring">github.com/sporring</a></td>
</tr>
<tr>
<td>ORCID:</td>
<td><a href="https://orcid.org/0000-0003-1261-6702">0000-0003-1261-6702</a></td>
</tr>
<tr>
<td>ResearcherID:</td>
<td><a href="https://publons.com/researcher/L-4499-2016/">L-4499-2016</a></td>
</tr>
<tr>
<td>Semantic Scholar:</td>
<td><a href="https://www.semanticscholar.org/author/J.-Sporring/1773176">1773176</a></td>
</tr>
<tr>
<td>DBLP:</td>
<td><a href="https://dblp.org/pid/33/5273.html">33/5273</a></td>
</tr>
<tr>
<td>Google Scholar:</td>
<td><a href="https://scholar.google.com/citations?user=COP1HUwAAAAJ">COP1HUwAAAAJ</a></td>
</tr>
</tbody>
</table>
</dl>
<h3>Short CV</h3>
<p>Jon Sporring received his Master and Ph.D. degree from the Department of Computer Science (DIKU), University of
Copenhagen, Denmark in 1995 and 1998, respectively. Part of his Ph.D. program was carried out at IBM Research
Center, Almaden, California, USA. Following his Ph.D, he worked as a visiting researcher at the Computer Vision
and Robotics Lab at Foundation for Research & Technology - Hellas, Greece, and as an assistant research
professor at 3D-Lab, School of Dentistry, University of Copenhagen. During 2003-2018 he was an associate
professor at DIKU. From 2008-2009 he was a part-time Senior Researcher at Nordic Bioscience a/s. In the period
2012-13, he is a visiting professor at the School of Computer Science, McGill University, Montreal, Canada. Jon
Sporring also co-founded DigiCorpus Aps in 2012 and served as Chief research officer of the company from 2012-16
developing computer vision-based systems for automatic feedback for physiotherapeutic rehabilitation. In
2007-2012, 2015-2019, and 2021 he was Deputy head for Research at DIKU. Since 2018, he is a full professor at
DIKU, and since 2019 he is the Deputy head of the Center for Quantifying Images for MAXIV (QIM).</p>
<h3>Research Interests</h3>
<p>My primary research field is Computer Science (Datalogi) and particularly mathematical and biomedical image processing (Billedbehandling) and pattern recognition (Mønstergenkendelse) and artificial intelligence (Kunstig intelligens, AI). I'm involved in Danish Bioimaging and Quantifying images from MAXIV (and other synchrotron resources) Presently I'm involved in the following projects:</p>
<ul>
<li>Statistics of subcellular geometric structures: We reconstruct and study the 3d dimensional structure of the
synaptic area as seen through electron microscopes</li>
<li>Dynamic tomographic reconstruction: We work on fast algorithms for reconstructing time sequences from
projection sequense with the application for medicine and biology.</li>
</li>
</ul>
<h3>Events</h3>
<p>I am involved in the following events:</p>
<ul>
<li>Backing group for the <a href="https://scia2025.org/">Scandinavian Conference on Image Analysis (SCIA) 2025</a>, 23-25 June 2025, Iceland.</li>
<li>Co-organizing <a href="https://sites.google.com/view/aarhustda/">Ph.D. School on Topological data analysis in stochastic geometry and image processing</a>, 4-8 August 2025, Denmark</li>
<li>Co-organizing <a href="https://multi-modal.compute.dtu.dk/">Ph.D. School on Multi-modal learning, 11-15 August 2025, Denmark</a></li>
<li><a href="previousEvents.html">Previous events</a></li>
</ul>
<h3>Teaching</h3>
<p>I teach computer science at bachelor, master, and phd level. Presently I'm involved in the following courses:
</p>
<ul>
<li>Deep learning (Danish, Computer Science, Bachelor course, <a href="https://kurser.ku.dk/course/ndak24002u/2024-2025">description</a>)</li>
<li>Programmering og problemløsning (Danish, Computer Science, Bachelor course, <a href="https://kurser.ku.dk/course/ndab15009u/2024-2025">description</a>)</li>
<li>Lineær algebra i datalogi (Danish, Computer Science, Bachelor course, <a href="https://kurser.ku.dk/course/nmab15002u/2024-2025">description</a>) </li>
<li>Cross Institutional Bioimaging (English, Biology, Ph.d. course, <a href="https://www.dambic.dk/index.php?page=Cross-Institutional-Bioimaging">link</a>, Material: <a href="https://github.com/sporring/bioimaging/tree/aca4a0e0bdd245a74cea53bc588dcbdcaa6c4344/ImageProcessingCrashCourse/Python">github/sporring/ImageProcessingCrashCourse/Python</a>)</li>
<li><a href="previousCourses.html">Previous courses</a></li>
</ul>
<p>For students seeking bachelor and master theses and other project ideas, I post some of my ideas on the Image
section's <a href="https://trello.com/b/GVhtdARX/projects4students">Trello board</a></p>
<p>Ph.D. students:</p>
<ul>
<li><a
href="https://di.ku.dk/english/staff/vip/?pure=en%2Fpersons%2Fchenhao-wang(3c7b79a3-484c-44e4-b6d7-47da5c6d7a98).html">Chenhao Wang</a>, 2021-</li>
<!-- <li><a href="https://forskning.ku.dk/soeg/result/?pure=da%2Fpersons%2Fyuan-wang(741dc909-2200-4cd4-98fc-3ea1a89f4587).html">Yuan
Wang</a>, 2020-2023</li>-->
<li><a
href="https://forskning.ku.dk/soeg/result/?pure=da%2Fpersons%2Fmette-bjerg-lindhoej(839e4d0f-c155-4b4b-94d6-daf943983897).html">Mette Bjerg Lindhøj</a>, 2018-2021</li>
<li><a
href="https://forskning.ku.dk/soeg/result/?pure=da%2Fpersons%2Fhans-jacob-teglbjaerg-stephensen(06f39744-94a8-4559-9e4b-099857519587).html">Hans Jacob Teglbjærg Stephensen</a>, 2018-2021</li>
<li>Leise Borg, 2014-2018</li>
<li>Mahdieh Khanmohammadi, 2012-2015</li>
<li>Alessandro Crimi, 2008-2011</li>
<li>Pechin Chien Pau Lo, 2007-2010</li>
<li>Lauge Sørensen, 2007-2010</li>
<li>Vladlena Gorbunova, 2007-2010</li>
<li>Lars Schjøth, 2006-2009</li>
<li>Kerawit Somchaipeng, 2002-2005</li>
<li>Niels Holm Olsen, 2000-2003</li>
</ul>
<h3>Projects etc.</h3>
<p>I am involved in the following projects, groups, and associations:</p>
<ul>
<li><a href="https://di.ku.dk/english/research/imagesection/">The IMAGE section</a></li>
<li><a href="http://qim.compute.dtu.dk">The Center for Quantification of Imaging Data from MAX IV (QIM)</a></li>
<li><a href="https://www.danishbioimaging.dk">Danish Bioimaging Network (DBI)</a></li>
<li><a href="https://www.dbi-infra.eu/">Danish Bioimaging Infrastructure (DBInfra)</a></li>
<li><a href="https://www.eurobioimaging.eu/">Euro Bioimaging</a></li>
<li><a href="https://cab.ku.dk">Center for Advanced Bioimaging (CAB)</a></li>
<li><a href="https://danfix.dtu.dk/">The Danish national facility for imaging withy X-rays (DANFIX)</a></li>
<li><a href="https://dsagm.compute.dtu.dk/">Dansk Selskab for Automatisk Genkendelse af Mønstre (DSAGM)</a></li>
<li><a href="https://www.frontiersin.org/journals/computer-science">Associate Editor for Frontiers in Computer Vision</a></li>
<li><a href="https://onlinelibrary.wiley.com/journal/13652818">Editorial Board of the Journal of Microscopy</a></li>
</ul>
<h4>Previous projects etc.</h4>
<ul>
<li><a href="http://csgb.dk">Centre for Stochastic Geometry and Advance Bioimaging (CSGB)</a></li>
<li><a href="http://www.drcmr.dk/max-iv-imagers">MAX4 Imagers</a></li>
<li><a href="https://cordis.europa.eu/project/id/IST-2001-35443">Deep Structure, Singularities, and Computer
Vision (DSSCV)</a></li>
</ul>
<h3>Selected Publications</h3>
<p>Please click <a
href="https://di.ku.dk/english/staff/vip/?pure=en%2Fpersons%2Fjon-sporring(9ee4d267-e636-40f4-a8de-e712c0e41d99)%2Fpublications.html">here</a> for a full list</a>. I also maintain a <a href="http://scholar.google.com/citations?user=COP1HUwAAAAJ">Google scholar profile</a>.
</p>
<div class=publication>
<a href="">A semi-automatic method for extracting mitochondrial cristae characteristics from 3D focused ion beam scanning electron microscopy data</a> Wang, C., Østergaard, L., Hasselholt, S. & Sporring, Jon, 2024, In: Communications Biology . 7, 1, 377.
</div>
<div class=publication>
<a href="https://doi.org/10.3389/fcomp.2022.939563">An algebra for local histogramss</a>, Sporring, Jon & Darkner, Sune, 2022, In: Frontiers in Computer Science. 4, p. 1-9.
</div>
<div class=publication>
<a href="https://link.springer.com/article/10.1007/s10851-021-01041-3">Measuring Shape Relations Using r-Parallel Sets</a>, Stephensen, Hans Jacob Teglbjærg, Svane, A. M., Villanueva, Carlos Benitez, Goldman, Steven Alan & Sporring, Jon, 2021, In: Journal of Mathematical Imaging and Vision. 63, p. 1069–1083 15 p.
</div>
<div class=publication>
<a href="https://www.nature.com/articles/s42003-020-0809-4">Restoring drifted electron microscope volumes using synaptic vesicles at sub-pixel accuracy</a> Stephensen, Hans Jacob Teglbjærg, Darkner, Sune & Sporring, Jon, 21 Feb 2020, In : Communications Biology. 3
</div>
<div class=publication>
<a href="https://ieeexplore.ieee.org/document/7987758">Collocation for diffeomorphic deformations in medical image registration</a> Darkner, S., Pai, A. S. U., Liptrot, M. G. & Sporring, J. 2018 In : IEEE Transactions on Pattern Analysis and Machine Intelligence. 40, 7, p. 1570-1583
</div>
<div class=publication>
<a href="https://static-curis.ku.dk/portal/files/179522186/R_nn_Nielsen_2017_Estimation.pdf">Estimation of sample spacing in stochastic processes</a> Rønn-Nielsen, A., Sporring, J. & Jensen, E. B. V. 2017 In : Image Analysis and Stereology. 36, 1, p. 43-49 7 p.
</div>
<div class=publication>
<a href="https://ieeexplore.ieee.org/document/7053934">Maurer-cartan forms for fields on surfaces: application to heart fiber geometry</a> Piuze, E., Sporring, J. & Siddiqi, K. 2015 In : IEEE Transactions on Pattern Analysis and Machine Intelligence. 37, 12, p. 2492-2504 13 p.
</div>
<div class=publication>
<a href="https://onlinelibrary.wiley.com/doi/abs/10.1111/cgf.12347">Photon differential splatting for rendering caustics</a> Frisvad, J. R., Schjøth, L., Erleben, K. & Sporring, J. 2014 In : Computer Graphics Forum. 33, 6, p. 252-263 12 p.
</div>
<div class=publication>
<a href="https://static-curis.ku.dk/portal/files/44040454/06341756.pdf">Locally orderless registration</a> Darkner, S. & Sporring, J. 2013 In : IEEE Transactions on Pattern Analysis and Machine Intelligence. 35, 6, p. 1437-1450 14 p.
</div>
<div class=publication>
<b>Physics-based Animation</b> Erleben, K., Sporring, J., Henriksen, K. & Dohlmann, H. 2005 Hingham, Mass.: Charles River Media. 817 p.
</div>
<div class=publication>
<a href="https://static-curis.ku.dk/portal/files/38552211/00761342.pdf">Information measures in scale-spaces</a> Sporring, J. & Weickert, J. 1999 In : IEEE Transactions on Information Theory. 45, 3, p. 1051-1058
</div>
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