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Missing files for reproducing Fig 3c #89

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chinaliye opened this issue Oct 28, 2024 · 0 comments
Open

Missing files for reproducing Fig 3c #89

chinaliye opened this issue Oct 28, 2024 · 0 comments

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@chinaliye
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Thanks for developing this great tool for predicting perturbation outcomes. However, I found it's impossible to reproduce Fig 3c in the paper because some important data files are not provided in both https://github.com/yhr91/GEARS_misc and https://github.com/snap-stanford/GEARS. Specifically, the missing files are shown in the figures below.
image
image
Also, I'm unable to reproduce these files using your codes in the github repository. I will appreciate it if you can share the codes which should reproduce these data files.

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