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Zarr backend followup: OME-NGFF, user-side improvements #6120

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5 of 10 tasks
fm3 opened this issue Mar 22, 2022 · 2 comments
Closed
5 of 10 tasks

Zarr backend followup: OME-NGFF, user-side improvements #6120

fm3 opened this issue Mar 22, 2022 · 2 comments

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@fm3
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fm3 commented Mar 22, 2022

Follow-up for reading zarr images in wk-backend backend (#6019)

  • handle multi-layers/ngff
  • pass through channels all the way to the front-end
  • expose as first-class feature to users
    • adapt frontend compatibility detection for upload
    • routes to add remote datasets Import Remote Zarr Datasets #6335
    • adapt documentation
    • Store Credentials on wk side in db rather than in datasource-properties.json
    • Do remote datasets need a datasource-properties.json at all?
@normanrz
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[ ] pass through channels all the way to the front-end

This could also be solved by adding a channelIndex field to the datasource metadata, which allows to cut out different channels of a dataset. Then, no frontend changes would be required.

@fm3
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fm3 commented Oct 21, 2022

The remaining todos are tracked in individual issues now: #6578 and #6525

@fm3 fm3 closed this as completed Oct 21, 2022
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