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load_easybuild_module.sh
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load_easybuild_module.sh
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# Script to load the environment module for a specific version of EasyBuild.
# If that module is not available yet, the current latest EasyBuild version of EasyBuild will be installed,
# and used to install the specific EasyBuild version being specified.
#
# This script must be sourced, since it makes changes in the current environment, like loading an EasyBuild module.
#
# This script is part of the EESSI software layer, see
# https://github.com/EESSI/software-layer.git
#
# author: Kenneth Hosye (@boegel, HPC-UGent)
#
# license: GPLv2
#
#
set -o pipefail
if [ $# -ne 1 ]; then
echo "Usage: $0 <EasyBuild version>" >&2
exit 1
fi
# don't use $EASYBUILD_VERSION, since that enables always running 'eb --version'
EB_VERSION=${1}
# make sure that environment variables that we expect to be set are indeed set
if [ -z "${TMPDIR}" ]; then
echo "\$TMPDIR is not set" >&2
exit 2
fi
# ${EB} is used to specify which 'eb' command should be used;
# can potentially be more than just 'eb', for example when using 'eb --optarch=GENERIC'
if [ -z "${EB}" ]; then
echo "\$EB is not set" >&2
exit 2
fi
# make sure that utility functions are defined (cfr. scripts/utils.sh script in EESSI/software-layer repo)
type check_exit_code
if [ $? -ne 0 ]; then
echo "check_exit_code function is not defined" >&2
exit 3
fi
echo ">> Checking for EasyBuild module..."
ml_av_easybuild_out=${TMPDIR}/ml_av_easybuild.out
module avail 2>&1 | grep -i easybuild/${EB_VERSION} &> ${ml_av_easybuild_out}
if [[ $? -eq 0 ]]; then
echo_green ">> Module for EasyBuild v${EB_VERSION} found!"
else
echo_yellow ">> No module yet for EasyBuild v${EB_VERSION}, installing it..."
EB_TMPDIR=${TMPDIR}/ebtmp
echo ">> Temporary installation (in ${EB_TMPDIR})..."
pip_install_out=${TMPDIR}/pip_install.out
pip3 install --prefix ${EB_TMPDIR} easybuild &> ${pip_install_out}
# keep track of original $PATH and $PYTHONPATH values, so we can restore them
ORIG_PATH=${PATH}
ORIG_PYTHONPATH=${PYTHONPATH}
echo ">> Final installation in ${EASYBUILD_INSTALLPATH}..."
export PATH=${EB_TMPDIR}/bin:${PATH}
export PYTHONPATH=$(ls -d ${EB_TMPDIR}/lib/python*/site-packages):${PYTHONPATH}
eb_install_out=${TMPDIR}/eb_install.out
ok_msg="Latest EasyBuild release installed, let's go!"
fail_msg="Installing latest EasyBuild release failed, that's not good... (output: ${eb_install_out})"
${EB} --install-latest-eb-release 2>&1 | tee ${eb_install_out}
check_exit_code $? "${ok_msg}" "${fail_msg}"
# maybe the module obtained with --install-latest-eb-release is exactly the EasyBuild version we wanted?
module avail 2>&1 | grep -i easybuild/${EB_VERSION} &> ${ml_av_easybuild_out}
if [[ $? -eq 0 ]]; then
echo_green ">> Module for EasyBuild v${EB_VERSION} found!"
else
eb_ec=EasyBuild-${EB_VERSION}.eb
echo_yellow ">> Still no module for EasyBuild v${EB_VERSION}, trying with easyconfig ${eb_ec}..."
${EB} --search ${eb_ec} | grep ${eb_ec} > /dev/null
if [[ $? -eq 0 ]]; then
echo "Easyconfig ${eb_ec} found for EasyBuild v${EB_VERSION}, so installing it..."
ok_msg="EasyBuild v${EB_VERSION} installed, alright!"
fail_msg="Installing EasyBuild v${EB_VERSION}, yikes! (output: ${eb_install_out})"
${EB} EasyBuild-${EB_VERSION}.eb 2>&1 | tee -a ${eb_install_out}
check_exit_code $? "${ok_msg}" "${fail_msg}"
else
fatal_error "No easyconfig found for EasyBuild v${EB_VERSION}"
fi
fi
# restore origin $PATH and $PYTHONPATH values, and clean up environment variables that are no longer needed
export PATH=${ORIG_PATH}
export PYTHONPATH=${ORIG_PYTHONPATH}
unset EB_TMPDIR ORIG_PATH ORIG_PYTHONPATH
module avail easybuild/${EB_VERSION} &> ${ml_av_easybuild_out}
if [[ $? -eq 0 ]]; then
echo_green ">> EasyBuild/${EB_VERSION} module installed!"
else
fatal_error "EasyBuild/${EB_VERSION} module failed to install?! (output of 'pip install' in ${pip_install_out}, output of 'eb' in ${eb_install_out}, output of 'module avail easybuild' in ${ml_av_easybuild_out})"
fi
fi
echo ">> Loading EasyBuild v${EB_VERSION} module..."
module load EasyBuild/${EB_VERSION}
eb_show_system_info_out=${TMPDIR}/eb_show_system_info.out
${EB} --show-system-info > ${eb_show_system_info_out}
if [[ $? -eq 0 ]]; then
echo_green ">> EasyBuild seems to be working!"
${EB} --version | grep "${EB_VERSION}"
if [[ $? -eq 0 ]]; then
echo_green "Found EasyBuild version ${EB_VERSION}, looking good!"
else
${EB} --version
fatal_error "Expected to find EasyBuild version ${EB_VERSION}, giving up here..."
fi
${EB} --show-config
else
cat ${eb_show_system_info_out}
fatal_error "EasyBuild not working?!"
fi
unset EB_VERSION