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To see all available qualifiers, see our documentation.
This downloads a reference dataset from one of:
If you use one of the above resources, please cite it.
The usage is:
ariba getref reference_name output_prefix
where reference_name is one of: argannot, card, resfinder, vfdb.
reference_name
argannot
card
resfinder
vfdb
For example, to download the CARD data:
ariba getref card out.card
The output of getref is used as input to the task [[prepareref|Task:-prepareref]].
getref
prepareref