! Column name barcodes must not be duplicated.

[Flu09]

> hca_bm <- Add_Mito_Ribo(object = mergedf, species = "Human")
Error in `rownames_to_column()`:
! Column name `barcodes` must not be duplicated.
Caused by error in `repaired_names()`:
! Names must be unique.
✖ These names are duplicated:
  * "barcodes" at locations 4 and 139.
Run `rlang::last_trace()` to see where the error occurred.

[Flu09]

duplicated_colnames <- colnames(metadata)[duplicated(colnames(metadata))]
> # Print duplicated column names
> print(duplicated_colnames)
character(0)


The 4th and 139th barcodes are
   [3] "D01_S01_AAACGGGTCAGTTCGA-1" "D01_S01_AAAGATGCACAACGCC-1"
 [139] "D01_S01_AGATTGCTCTAGAGTC-1" "D01_S01_AGCAGCCGTCTCTTAT-1"

[samuel-marsh]

Hi @Flu09,

Thanks for reporting the issue. It's not the 4th and 139th barcodes but reference to the columns. I believe the issue was internal to function and not the input data. I think my latest push should have resolved the issue.

Please install latest version:

devtools::install_github(repo = "samuel-marsh/scCustomize", ref = "release/2.2.0")

If the issue persists after updating please let me know and I will reopen the issue.

Thanks!
Sam