From 0cccc4fa6d6f76a2ead150fba70f1d6081aed024 Mon Sep 17 00:00:00 2001
From: alperaltuntas <alperaltuntas@gmail.com>
Date: Tue, 24 May 2022 17:13:04 -0600
Subject: [PATCH 1/3] add the missing RYF DROF stream entries in xml files

---
 .../__pycache__/buildnmlcpython-37.pyc        | Bin 0 -> 4420 bytes
 .../__pycache__/buildnmlcpython-39.pyc        | Bin 0 -> 4463 bytes
 drof/cime_config/namelist_definition_drof.xml |   3 +
 drof/cime_config/stream_definition_drof.xml   |  96 ++++++++++++++++++
 4 files changed, 99 insertions(+)
 create mode 100644 drof/cime_config/__pycache__/buildnmlcpython-37.pyc
 create mode 100644 drof/cime_config/__pycache__/buildnmlcpython-39.pyc

diff --git a/drof/cime_config/__pycache__/buildnmlcpython-37.pyc b/drof/cime_config/__pycache__/buildnmlcpython-37.pyc
new file mode 100644
index 0000000000000000000000000000000000000000..c397f5576ab588c7e57b9d3766460968c37f20d5
GIT binary patch
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HcmV?d00001

diff --git a/drof/cime_config/__pycache__/buildnmlcpython-39.pyc b/drof/cime_config/__pycache__/buildnmlcpython-39.pyc
new file mode 100644
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GIT binary patch
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literal 0
HcmV?d00001

diff --git a/drof/cime_config/namelist_definition_drof.xml b/drof/cime_config/namelist_definition_drof.xml
index 1428a93389..ead6e92098 100644
--- a/drof/cime_config/namelist_definition_drof.xml
+++ b/drof/cime_config/namelist_definition_drof.xml
@@ -21,6 +21,9 @@
       <value drof_mode="DIATREN_IAF_AIS55_RX1">rof.diatren_iaf_ais55_rx1</value>
       <value drof_mode="IAF_JRA_1p4_2018"     >rof.iaf_jra_1p4_2018</value>
       <value drof_mode="IAF_JRA"              >rof.iaf_jra</value>
+      <value drof_mode="RYF8485_JRA"          >rof.ryf8485_jra</value>
+      <value drof_mode="RYF9091_JRA"          >rof.ryf9091_jra</value>
+      <value drof_mode="RYF0304_JRA"          >rof.ryf0304_jra</value>
     </values>
   </entry>
 
diff --git a/drof/cime_config/stream_definition_drof.xml b/drof/cime_config/stream_definition_drof.xml
index 8c3362a9d6..d14e5cbbe2 100644
--- a/drof/cime_config/stream_definition_drof.xml
+++ b/drof/cime_config/stream_definition_drof.xml
@@ -475,6 +475,102 @@
     <stream_readmode>single</stream_readmode>
   </stream_entry>
 
+  <stream_entry name="rof.ryf8485_jra">
+    <stream_meshfile>
+      <meshfile>$DIN_LOC_ROOT/lnd/dlnd7/JRA55/JRA.v1.4.runoff.1958_ESMFmesh_cdf5_20201020.nc</meshfile>
+    </stream_meshfile>
+    <stream_datafiles>
+      <file first_year="1984" last_year="1984">$DIN_LOC_ROOT/lnd/dlnd7/JRA55/RAF_8485.JRA.v1.3.runoff.180404.nc</file>
+    </stream_datafiles>
+    <stream_datavars>
+      <var>rofl Forr_rofl</var>
+      <var>rofi Forr_rofi</var>
+    </stream_datavars>
+    <stream_lev_dimname>null</stream_lev_dimname>
+    <stream_mapalgo>
+      <mapalgo>bilinear</mapalgo>
+    </stream_mapalgo>
+    <stream_vectors>null</stream_vectors>
+    <stream_year_align>1</stream_year_align>
+    <stream_year_first>1984</stream_year_first>
+    <stream_year_last>1984</stream_year_last>
+    <stream_offset>0</stream_offset>
+    <stream_tintalgo>
+      <tintalgo>upper</tintalgo>
+    </stream_tintalgo>
+    <stream_taxmode>
+      <taxmode>cycle</taxmode>
+    </stream_taxmode>
+    <stream_dtlimit>
+      <dtlimit>3.0</dtlimit>
+    </stream_dtlimit>
+    <stream_readmode>single</stream_readmode>
+  </stream_entry>
+
+  <stream_entry name="rof.ryf9091_jra">
+    <stream_meshfile>
+      <meshfile>$DIN_LOC_ROOT/lnd/dlnd7/JRA55/JRA.v1.4.runoff.1958_ESMFmesh_cdf5_20201020.nc</meshfile>
+    </stream_meshfile>
+    <stream_datafiles>
+      <file first_year="1990" last_year="1990">$DIN_LOC_ROOT/lnd/dlnd7/JRA55/RAF_9091.JRA.v1.3.runoff.180404.nc</file>
+    </stream_datafiles>
+    <stream_datavars>
+      <var>rofl Forr_rofl</var>
+      <var>rofi Forr_rofi</var>
+    </stream_datavars>
+    <stream_lev_dimname>null</stream_lev_dimname>
+    <stream_mapalgo>
+      <mapalgo>bilinear</mapalgo>
+    </stream_mapalgo>
+    <stream_vectors>null</stream_vectors>
+    <stream_year_align>1</stream_year_align>
+    <stream_year_first>1990</stream_year_first>
+    <stream_year_last>1990</stream_year_last>
+    <stream_offset>0</stream_offset>
+    <stream_tintalgo>
+      <tintalgo>upper</tintalgo>
+    </stream_tintalgo>
+    <stream_taxmode>
+      <taxmode>cycle</taxmode>
+    </stream_taxmode>
+    <stream_dtlimit>
+      <dtlimit>3.0</dtlimit>
+    </stream_dtlimit>
+    <stream_readmode>single</stream_readmode>
+  </stream_entry>
+
+  <stream_entry name="rof.ryf0304_jra">
+    <stream_meshfile>
+      <meshfile>$DIN_LOC_ROOT/lnd/dlnd7/JRA55/JRA.v1.4.runoff.1958_ESMFmesh_cdf5_20201020.nc</meshfile>
+    </stream_meshfile>
+    <stream_datafiles>
+      <file first_year="2003" last_year="2003">$DIN_LOC_ROOT/lnd/dlnd7/JRA55/RAF_0304.JRA.v1.3.runoff.180404.nc</file>
+    </stream_datafiles>
+    <stream_datavars>
+      <var>rofl Forr_rofl</var>
+      <var>rofi Forr_rofi</var>
+    </stream_datavars>
+    <stream_lev_dimname>null</stream_lev_dimname>
+    <stream_mapalgo>
+      <mapalgo>bilinear</mapalgo>
+    </stream_mapalgo>
+    <stream_vectors>null</stream_vectors>
+    <stream_year_align>1</stream_year_align>
+    <stream_year_first>2003</stream_year_first>
+    <stream_year_last>2003</stream_year_last>
+    <stream_offset>0</stream_offset>
+    <stream_tintalgo>
+      <tintalgo>upper</tintalgo>
+    </stream_tintalgo>
+    <stream_taxmode>
+      <taxmode>cycle</taxmode>
+    </stream_taxmode>
+    <stream_dtlimit>
+      <dtlimit>3.0</dtlimit>
+    </stream_dtlimit>
+    <stream_readmode>single</stream_readmode>
+  </stream_entry>
+
   <stream_entry name="rof.cplhist">
     <stream_meshfile>
       <meshfile>$ROF_DOMAIN_MESH</meshfile>

From 66a979a05d75756c87f6944d8fbac366ede820b0 Mon Sep 17 00:00:00 2001
From: alperaltuntas <alperaltuntas@gmail.com>
Date: Tue, 24 May 2022 17:17:32 -0600
Subject: [PATCH 2/3] remove inadvertently added pychache

---
 .../__pycache__/buildnmlcpython-37.pyc           | Bin 4420 -> 0 bytes
 .../__pycache__/buildnmlcpython-39.pyc           | Bin 4463 -> 0 bytes
 2 files changed, 0 insertions(+), 0 deletions(-)
 delete mode 100644 drof/cime_config/__pycache__/buildnmlcpython-37.pyc
 delete mode 100644 drof/cime_config/__pycache__/buildnmlcpython-39.pyc

diff --git a/drof/cime_config/__pycache__/buildnmlcpython-37.pyc b/drof/cime_config/__pycache__/buildnmlcpython-37.pyc
deleted file mode 100644
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From eb569de778a6f051c44c412426fc697516657f93 Mon Sep 17 00:00:00 2001
From: alperaltuntas <alperaltuntas@gmail.com>
Date: Tue, 24 May 2022 17:18:50 -0600
Subject: [PATCH 3/3] add pycache to gitignore

---
 .gitignore | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/.gitignore b/.gitignore
index 259148fa18..34b286f3e9 100644
--- a/.gitignore
+++ b/.gitignore
@@ -30,3 +30,6 @@
 *.exe
 *.out
 *.app
+
+# ignore pycache
+__pycache__