Main tool: Integron Finder
Code repository: https://github.com/gem-pasteur/Integron_Finder
Additional tools:
- Python 3.10.12
- numpy 2.1.1
- pandas 2.2.3
- matplolib 3.9.2
- biopython 1.84
- Prodigal V2.6.3
- INFERNAL 1.1.4
- HMMER 3.3.2
Basic information on how to use this tool:
- executable: integron_finder
- help: --help
- version: --version
- description: Finds integrons in DNA sequences
Full documentation: https://integronfinder.readthedocs.io/en/latest/
integron_finder --local-max --circ --keep-tmp genome.fna