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setup.py
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setup.py
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from setuptools import setup
import sys
req = ['biopython==1.70', 'Cython==0.24', 'pysam==0.13', 'rpy2>=2.7.0,<=2.8.6']
if int(sys.version.split()[0][0]) > 2:
req = ['biopython>=1.70', 'Cython>=0.24', "pysam@https://github.com/pysam-developers/pysam/tarball/master#egg=pysam", 'rpy2>=2.7.0']
setup(name='Xome_Blender',
version='0.1',
description='Generates synthetic cancer genomes with different contamination level and intra-tumor heterogeneity and devoid of any synthetic element',
url='https://github.com/rsemeraro/XomeBlender',
author='Roberto Semeraro',
author_email='[email protected]',
license='LICENSE.txt',
package_data={'xomeblender': ['*py']},
packages=['xomeblender'],
include_package_data=False,
install_requires=req
)