Compilation error for catkin_make?

[shobhitcito]

System information:
Distributor ID: Ubuntu
Description: Ubuntu 16.04.6 LTS
Release: 16.04
Codename: xenial

ROS version: kinetic

Error:

CMake Error at /opt/ros/kinetic/share/catkin/cmake/catkin_workspace.cmake:95 (message):
  This workspace contains non-catkin packages in it, and catkin cannot build
  a non-homogeneous workspace without isolation.  Try the
  '**catkin_make_isolated**' command instead.
Call Stack (most recent call first):
  CMakeLists.txt:67 (catkin_workspace)


-- Configuring incomplete, errors occurred!
See also "/home/ra-om1/overlay_ws/build/CMakeFiles/CMakeOutput.log".
See also "/home/ra-om1/overlay_ws/build/CMakeFiles/CMakeError.log".
Invoking "cmake" failed

Following which I also tried catkin_make_isolated, which also ends up giving compilation error:
ERROR:

$ catkin_make_isolated
Base path: /home/tihbohs/overlay_ws
Source space: /home/tihbohs/overlay_ws/src
Build space: /home/tihbohs/overlay_ws/build_isolated
Devel space: /home/tihbohs/overlay_ws/devel_isolated
Install space: /home/tihbohs/overlay_ws/install_isolated
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
~~  traversing 60 packages in topological order:
~~  - abb
~~  - abb_file_suite
~~  - abb_irb1200_5_90_ikfast_manipulator_plugin
~~  - abb_irb1200_support
~~  - abb_irb2400_moveit_config
~~  - abb_irb2400_moveit_plugins
~~  - abb_irb2400_support
~~  - abb_irb4400_support
~~  - abb_irb5400_support
~~  - abb_irb6600_support
~~  - abb_irb6640_moveit_config
~~  - abb_irb6640_support
~~  - abb_resources
~~  - blending_end_effector
~~  - descartes
~~  - descartes_core
~~  - descartes_trajectory
~~  - descartes_moveit
~~  - descartes_planner
~~  - descartes_tests
~~  - descartes_utilities
~~  - godel
~~  - godel_irb1200_support
~~  - godel_irb2400_moveit_config
~~  - godel_irb2400_support
~~  - godel_msgs
~~  - godel_openvoronoi
~~  - godel_param_helpers
~~  - godel_plugins
~~  - godel_process_path_generation
~~  - godel_process_planning
~~  - godel_scan_analysis
~~  - godel_simple_gui
~~  - godel_utils
~~  - industrial_core
~~  - industrial_deprecated
~~  - industrial_msgs
~~  - industrial_robot_simulator
~~  - industrial_trajectory_filters
~~  - industrial_utils
~~  - irb2400_ikfast_manipulator_plugin
~~  - abb_irb2400_descartes
~~  - libsocket (plain cmake)
~~  - keyence_experimental
~~  - meshing_plugins_base
~~  - path_planning_plugins_base
~~  - meshing_plugins
~~  - path_planning_plugins
~~  - godel_polygon_offset
~~  - simple_message
~~  - industrial_robot_client
~~  - abb_driver
~~  - industrial_robot_simulator_service
~~  - godel_path_execution
~~  - swri_profiler_msgs
~~  - swri_profiler
~~  - godel_process_execution
~~  - godel_surface_detection
~~  - godel_irb1200_moveit_config
~~  - swri_profiler_tools
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
The packages or cmake arguments have changed, forcing cmake invocation

==> Processing catkin package: 'abb'
==> Creating build directory: 'build_isolated/abb'
==> cmake /home/tihbohs/overlay_ws/src/abb/abb -DCATKIN_DEVEL_PREFIX=/home/tihbohs/overlay_ws/devel_isolated/abb -DCMAKE_INSTALL_PREFIX=/home/tihbohs/overlay_ws/install_isolated -G Unix Makefiles in '/home/tihbohs/overlay_ws/build_isolated/abb'
-- The C compiler identification is GNU 7.4.0
-- The CXX compiler identification is GNU 7.4.0
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Using CATKIN_DEVEL_PREFIX: /home/tihbohs/overlay_ws/devel_isolated/abb
-- Using CMAKE_PREFIX_PATH: /home/tihbohs/catkin_ws/devel;/opt/ros/melodic
-- This workspace overlays: /home/tihbohs/catkin_ws/devel;/opt/ros/melodic
-- Found PythonInterp: /usr/bin/python2 (found suitable version "2.7.17", minimum required is "2")
-- Using PYTHON_EXECUTABLE: /usr/bin/python2
-- Using Debian Python package layout
-- Using empy: /usr/bin/empy
-- Using CATKIN_ENABLE_TESTING: ON
-- Call enable_testing()
-- Using CATKIN_TEST_RESULTS_DIR: /home/tihbohs/overlay_ws/build_isolated/abb/test_results
-- Found gtest sources under '/usr/src/googletest': gtests will be built
-- Found gmock sources under '/usr/src/googletest': gmock will be built
-- Found PythonInterp: /usr/bin/python2 (found version "2.7.17")
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Using Python nosetests: /usr/bin/nosetests-2.7
-- catkin 0.7.19
-- BUILD_SHARED_LIBS is on
-- Configuring done
-- Generating done
-- Build files have been written to: /home/tihbohs/overlay_ws/build_isolated/abb
==> make -j8 -l8 in '/home/tihbohs/overlay_ws/build_isolated/abb'
<== Finished processing package [1 of 60]: 'abb'

==> Processing catkin package: 'abb_file_suite'
==> Creating build directory: 'build_isolated/abb_file_suite'
==> Building with env: '/home/tihbohs/overlay_ws/devel_isolated/abb/env.sh'
==> cmake /home/tihbohs/overlay_ws/src/godel/godel_robots/abb/abb_file_suite -DCATKIN_DEVEL_PREFIX=/home/tihbohs/overlay_ws/devel_isolated/abb_file_suite -DCMAKE_INSTALL_PREFIX=/home/tihbohs/overlay_ws/install_isolated -G Unix Makefiles in '/home/tihbohs/overlay_ws/build_isolated/abb_file_suite'
-- The C compiler identification is GNU 7.4.0
-- The CXX compiler identification is GNU 7.4.0
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Using CATKIN_DEVEL_PREFIX: /home/tihbohs/overlay_ws/devel_isolated/abb_file_suite
-- Using CMAKE_PREFIX_PATH: /home/tihbohs/overlay_ws/devel_isolated/abb;/home/tihbohs/catkin_ws/devel;/opt/ros/melodic
-- This workspace overlays: /home/tihbohs/overlay_ws/devel_isolated/abb;/home/tihbohs/catkin_ws/devel;/opt/ros/melodic
-- Found PythonInterp: /usr/bin/python2 (found suitable version "2.7.17", minimum required is "2")
-- Using PYTHON_EXECUTABLE: /usr/bin/python2
-- Using Debian Python package layout
-- Using empy: /usr/bin/empy
-- Using CATKIN_ENABLE_TESTING: ON
-- Call enable_testing()
-- Using CATKIN_TEST_RESULTS_DIR: /home/tihbohs/overlay_ws/build_isolated/abb_file_suite/test_results
-- Found gtest sources under '/usr/src/googletest': gtests will be built
-- Found gmock sources under '/usr/src/googletest': gmock will be built
-- Found PythonInterp: /usr/bin/python2 (found version "2.7.17")
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Using Python nosetests: /usr/bin/nosetests-2.7
-- catkin 0.7.19
-- BUILD_SHARED_LIBS is on
-- Using these message generators: gencpp;geneus;genlisp;gennodejs;genpy
-- abb_file_suite: 0 messages, 1 services
CMake Warning at /opt/ros/melodic/share/catkin/cmake/catkin_package.cmake:166 (message):
  catkin_package() DEPENDS on 'curl' but neither 'curl_INCLUDE_DIRS' nor
  'curl_LIBRARIES' is defined.
Call Stack (most recent call first):
  /opt/ros/melodic/share/catkin/cmake/catkin_package.cmake:102 (_catkin_package)
  CMakeLists.txt:20 (catkin_package)


-- Configuring done
-- Generating done
-- Build files have been written to: /home/tihbohs/overlay_ws/build_isolated/abb_file_suite
==> make -j8 -l8 in '/home/tihbohs/overlay_ws/build_isolated/abb_file_suite'
Scanning dependencies of target _abb_file_suite_generate_messages_check_deps_ExecuteProgram
Scanning dependencies of target std_msgs_generate_messages_lisp
Scanning dependencies of target std_msgs_generate_messages_cpp
Scanning dependencies of target std_msgs_generate_messages_py
Scanning dependencies of target std_msgs_generate_messages_eus
Scanning dependencies of target std_msgs_generate_messages_nodejs
Scanning dependencies of target rapid_generator
[  0%] Built target std_msgs_generate_messages_lisp
[  0%] Built target std_msgs_generate_messages_cpp
[  0%] Built target std_msgs_generate_messages_py
[  0%] Built target std_msgs_generate_messages_eus
[  0%] Built target std_msgs_generate_messages_nodejs
[  7%] Building CXX object rapid_generator/CMakeFiles/rapid_generator.dir/src/rapid_emitter.cpp.o
[  7%] Built target _abb_file_suite_generate_messages_check_deps_ExecuteProgram
Scanning dependencies of target abb_file_suite_generate_messages_eus
Scanning dependencies of target abb_file_suite_generate_messages_nodejs
Scanning dependencies of target abb_file_suite_generate_messages_py
Scanning dependencies of target abb_file_suite_generate_messages_cpp
Scanning dependencies of target abb_file_suite_generate_messages_lisp
[ 14%] Generating EusLisp code from abb_file_suite/ExecuteProgram.srv
[ 21%] Generating EusLisp manifest code for abb_file_suite
[ 28%] Generating Javascript code from abb_file_suite/ExecuteProgram.srv
[ 42%] Generating Python code from SRV abb_file_suite/ExecuteProgram
[ 42%] Generating C++ code from abb_file_suite/ExecuteProgram.srv
[ 50%] Generating Lisp code from abb_file_suite/ExecuteProgram.srv
[ 50%] Built target abb_file_suite_generate_messages_nodejs
[ 50%] Built target abb_file_suite_generate_messages_lisp
[ 50%] Built target abb_file_suite_generate_messages_cpp
[ 57%] Generating Python srv __init__.py for abb_file_suite
[ 64%] Linking CXX shared library /home/tihbohs/overlay_ws/devel_isolated/abb_file_suite/lib/librapid_generator.so
[ 64%] Built target abb_file_suite_generate_messages_py
[ 64%] Built target rapid_generator
Scanning dependencies of target ros_abb_ftp_interface
[ 71%] Building CXX object CMakeFiles/ros_abb_ftp_interface.dir/src/abb_motion_ftp_downloader.cpp.o
[ 78%] Building CXX object CMakeFiles/ros_abb_ftp_interface.dir/src/ftp_upload.cpp.o
[ 78%] Built target abb_file_suite_generate_messages_eus
Scanning dependencies of target abb_file_suite_generate_messages
[ 78%] Built target abb_file_suite_generate_messages
[ 85%] Linking CXX shared library /home/tihbohs/overlay_ws/devel_isolated/abb_file_suite/lib/libros_abb_ftp_interface.so
[ 85%] Built target ros_abb_ftp_interface
Scanning dependencies of target ros_abb_ftp_interface_node
[ 92%] Building CXX object CMakeFiles/ros_abb_ftp_interface_node.dir/src/abb_motion_ftp_downloader_node.cpp.o
[100%] Linking CXX executable /home/tihbohs/overlay_ws/devel_isolated/abb_file_suite/lib/abb_file_suite/ros_abb_ftp_interface_node
[100%] Built target ros_abb_ftp_interface_node
<== Finished processing package [2 of 60]: 'abb_file_suite'

==> Processing catkin package: 'abb_irb1200_5_90_ikfast_manipulator_plugin'
==> Creating build directory: 'build_isolated/abb_irb1200_5_90_ikfast_manipulator_plugin'
==> Building with env: '/home/tihbohs/overlay_ws/devel_isolated/abb_file_suite/env.sh'
==> cmake /home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin -DCATKIN_DEVEL_PREFIX=/home/tihbohs/overlay_ws/devel_isolated/abb_irb1200_5_90_ikfast_manipulator_plugin -DCMAKE_INSTALL_PREFIX=/home/tihbohs/overlay_ws/install_isolated -G Unix Makefiles in '/home/tihbohs/overlay_ws/build_isolated/abb_irb1200_5_90_ikfast_manipulator_plugin'
-- The C compiler identification is GNU 7.4.0
-- The CXX compiler identification is GNU 7.4.0
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Using CATKIN_DEVEL_PREFIX: /home/tihbohs/overlay_ws/devel_isolated/abb_irb1200_5_90_ikfast_manipulator_plugin
-- Using CMAKE_PREFIX_PATH: /home/tihbohs/overlay_ws/devel_isolated/abb_file_suite;/home/tihbohs/overlay_ws/devel_isolated/abb;/home/tihbohs/catkin_ws/devel;/opt/ros/melodic
-- This workspace overlays: /home/tihbohs/overlay_ws/devel_isolated/abb_file_suite;/home/tihbohs/overlay_ws/devel_isolated/abb;/home/tihbohs/catkin_ws/devel;/opt/ros/melodic
-- Found PythonInterp: /usr/bin/python2 (found suitable version "2.7.17", minimum required is "2")
-- Using PYTHON_EXECUTABLE: /usr/bin/python2
-- Using Debian Python package layout
-- Using empy: /usr/bin/empy
-- Using CATKIN_ENABLE_TESTING: ON
-- Call enable_testing()
-- Using CATKIN_TEST_RESULTS_DIR: /home/tihbohs/overlay_ws/build_isolated/abb_irb1200_5_90_ikfast_manipulator_plugin/test_results
-- Found gtest sources under '/usr/src/googletest': gtests will be built
-- Found gmock sources under '/usr/src/googletest': gmock will be built
-- Found PythonInterp: /usr/bin/python2 (found version "2.7.17")
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Using Python nosetests: /usr/bin/nosetests-2.7
-- catkin 0.7.19
-- BUILD_SHARED_LIBS is on
-- Using these message generators: gencpp;geneus;genlisp;gennodejs;genpy
-- Looking for sgemm_
-- Looking for sgemm_ - found
-- A library with BLAS API found.
-- Looking for cheev_
-- Looking for cheev_ - found
-- A library with LAPACK API found.
-- Configuring done
-- Generating done
-- Build files have been written to: /home/tihbohs/overlay_ws/build_isolated/abb_irb1200_5_90_ikfast_manipulator_plugin
==> make -j8 -l8 in '/home/tihbohs/overlay_ws/build_isolated/abb_irb1200_5_90_ikfast_manipulator_plugin'
Scanning dependencies of target abb_irb1200_5_90_manipulator_moveit_ikfast_plugin
[ 50%] Building CXX object CMakeFiles/abb_irb1200_5_90_manipulator_moveit_ikfast_plugin.dir/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp.o
/home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp: In member function ‘virtual bool ikfast_kinematics_plugin::IKFastKinematicsPlugin::initialize(const string&, const string&, const string&, const string&, double)’:
/home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:324:86: warning: ‘virtual void kinematics::KinematicsBase::setValues(const string&, const string&, const string&, const string&, double)’ is deprecated [-Wdeprecated-declarations]
   setValues(robot_description, group_name, base_name, tip_name, search_discretization);
                                                                                      ^
In file included from /home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:50:0:
/opt/ros/melodic/include/moveit/kinematics_base/kinematics_base.h:339:34: note: declared here
   MOVEIT_DEPRECATED virtual void setValues(const std::string& robot_description, const std::string& group_name,
                                  ^~~~~~~~~
/home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:366:102: error: no matching function for call to ‘const_pointer_cast<urdf::Link>(urdf::LinkConstSharedPtr)’
   urdf::LinkSharedPtr link = boost::const_pointer_cast<urdf::Link>(robot_model.getLink(getTipFrame()));
                                                                                                      ^
In file included from /usr/include/boost/shared_ptr.hpp:17:0,
                 from /opt/ros/melodic/include/ros/forwards.h:37,
                 from /opt/ros/melodic/include/ros/common.h:37,
                 from /opt/ros/melodic/include/ros/ros.h:43,
                 from /home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:49:
/usr/include/boost/smart_ptr/shared_ptr.hpp:888:42: note: candidate: template<class T, class U> boost::shared_ptr<X> boost::const_pointer_cast(const boost::shared_ptr<U>&)
 template<class T, class U> shared_ptr<T> const_pointer_cast( shared_ptr<U> const & r ) BOOST_SP_NOEXCEPT
                                          ^~~~~~~~~~~~~~~~~~
/usr/include/boost/smart_ptr/shared_ptr.hpp:888:42: note:   template argument deduction/substitution failed:
/home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:366:102: note:   ‘urdf::LinkConstSharedPtr {aka std::shared_ptr<const urdf::Link>}’ is not derived from ‘const boost::shared_ptr<U>’
   urdf::LinkSharedPtr link = boost::const_pointer_cast<urdf::Link>(robot_model.getLink(getTipFrame()));
                                                                                                      ^
In file included from /usr/include/boost/shared_ptr.hpp:17:0,
                 from /opt/ros/melodic/include/ros/forwards.h:37,
                 from /opt/ros/melodic/include/ros/common.h:37,
                 from /opt/ros/melodic/include/ros/ros.h:43,
                 from /home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:49:
/usr/include/boost/smart_ptr/shared_ptr.hpp:930:42: note: candidate: template<class T, class U> boost::shared_ptr<X> boost::const_pointer_cast(boost::shared_ptr<U>&&)
 template<class T, class U> shared_ptr<T> const_pointer_cast( shared_ptr<U> && r ) BOOST_SP_NOEXCEPT
                                          ^~~~~~~~~~~~~~~~~~
/usr/include/boost/smart_ptr/shared_ptr.hpp:930:42: note:   template argument deduction/substitution failed:
/home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:366:102: note:   ‘urdf::LinkConstSharedPtr {aka std::shared_ptr<const urdf::Link>}’ is not derived from ‘boost::shared_ptr<U>’
   urdf::LinkSharedPtr link = boost::const_pointer_cast<urdf::Link>(robot_model.getLink(getTipFrame()));
                                                                                                      ^
/home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp: In member function ‘virtual bool ikfast_kinematics_plugin::IKFastKinematicsPlugin::searchPositionIK(const Pose&, const std::vector<double>&, double, const std::vector<double>&, std::vector<double>&, const IKCallbackFn&, moveit_msgs::MoveItErrorCodes&, const kinematics::KinematicsQueryOptions&) const’:
/home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:880:67: warning: ‘kinematics::KinematicsBase::search_discretization_’ is deprecated [-Wdeprecated-declarations]
     num_positive_increments = (int)((max_limit - initial_guess) / search_discretization_);
                                                                   ^~~~~~~~~~~~~~~~~~~~~~
In file included from /home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:50:0:
/opt/ros/melodic/include/moveit/kinematics_base/kinematics_base.h:592:28: note: declared here
   MOVEIT_DEPRECATED double search_discretization_;
                            ^~~~~~~~~~~~~~~~~~~~~~
/home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:880:67: warning: ‘kinematics::KinematicsBase::search_discretization_’ is deprecated [-Wdeprecated-declarations]
     num_positive_increments = (int)((max_limit - initial_guess) / search_discretization_);
                                                                   ^~~~~~~~~~~~~~~~~~~~~~
In file included from /home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:50:0:
/opt/ros/melodic/include/moveit/kinematics_base/kinematics_base.h:592:28: note: declared here
   MOVEIT_DEPRECATED double search_discretization_;
                            ^~~~~~~~~~~~~~~~~~~~~~
/home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:881:67: warning: ‘kinematics::KinematicsBase::search_discretization_’ is deprecated [-Wdeprecated-declarations]
     num_negative_increments = (int)((initial_guess - min_limit) / search_discretization_);
                                                                   ^~~~~~~~~~~~~~~~~~~~~~
In file included from /home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:50:0:
/opt/ros/melodic/include/moveit/kinematics_base/kinematics_base.h:592:28: note: declared here
   MOVEIT_DEPRECATED double search_discretization_;
                            ^~~~~~~~~~~~~~~~~~~~~~
/home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:881:67: warning: ‘kinematics::KinematicsBase::search_discretization_’ is deprecated [-Wdeprecated-declarations]
     num_negative_increments = (int)((initial_guess - min_limit) / search_discretization_);
                                                                   ^~~~~~~~~~~~~~~~~~~~~~
In file included from /home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:50:0:
/opt/ros/melodic/include/moveit/kinematics_base/kinematics_base.h:592:28: note: declared here
   MOVEIT_DEPRECATED double search_discretization_;
                            ^~~~~~~~~~~~~~~~~~~~~~
/home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:885:86: warning: ‘kinematics::KinematicsBase::search_discretization_’ is deprecated [-Wdeprecated-declarations]
     num_positive_increments = (joint_max_vector_[free_params_[0]] - initial_guess) / search_discretization_;
                                                                                      ^~~~~~~~~~~~~~~~~~~~~~
In file included from /home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:50:0:
/opt/ros/melodic/include/moveit/kinematics_base/kinematics_base.h:592:28: note: declared here
   MOVEIT_DEPRECATED double search_discretization_;
                            ^~~~~~~~~~~~~~~~~~~~~~
/home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:885:86: warning: ‘kinematics::KinematicsBase::search_discretization_’ is deprecated [-Wdeprecated-declarations]
     num_positive_increments = (joint_max_vector_[free_params_[0]] - initial_guess) / search_discretization_;
                                                                                      ^~~~~~~~~~~~~~~~~~~~~~
In file included from /home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:50:0:
/opt/ros/melodic/include/moveit/kinematics_base/kinematics_base.h:592:28: note: declared here
   MOVEIT_DEPRECATED double search_discretization_;
                            ^~~~~~~~~~~~~~~~~~~~~~
/home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:886:86: warning: ‘kinematics::KinematicsBase::search_discretization_’ is deprecated [-Wdeprecated-declarations]
     num_negative_increments = (initial_guess - joint_min_vector_[free_params_[0]]) / search_discretization_;
                                                                                      ^~~~~~~~~~~~~~~~~~~~~~
In file included from /home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:50:0:
/opt/ros/melodic/include/moveit/kinematics_base/kinematics_base.h:592:28: note: declared here
   MOVEIT_DEPRECATED double search_discretization_;
                            ^~~~~~~~~~~~~~~~~~~~~~
/home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:886:86: warning: ‘kinematics::KinematicsBase::search_discretization_’ is deprecated [-Wdeprecated-declarations]
     num_negative_increments = (initial_guess - joint_min_vector_[free_params_[0]]) / search_discretization_;
                                                                                      ^~~~~~~~~~~~~~~~~~~~~~
In file included from /home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:50:0:
/opt/ros/melodic/include/moveit/kinematics_base/kinematics_base.h:592:28: note: declared here
   MOVEIT_DEPRECATED double search_discretization_;
                            ^~~~~~~~~~~~~~~~~~~~~~
/home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:978:32: warning: ‘kinematics::KinematicsBase::search_discretization_’ is deprecated [-Wdeprecated-declarations]
     vfree[0] = initial_guess + search_discretization_ * counter;
                                ^~~~~~~~~~~~~~~~~~~~~~
In file included from /home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:50:0:
/opt/ros/melodic/include/moveit/kinematics_base/kinematics_base.h:592:28: note: declared here
   MOVEIT_DEPRECATED double search_discretization_;
                            ^~~~~~~~~~~~~~~~~~~~~~
/home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:978:32: warning: ‘kinematics::KinematicsBase::search_discretization_’ is deprecated [-Wdeprecated-declarations]
     vfree[0] = initial_guess + search_discretization_ * counter;
                                ^~~~~~~~~~~~~~~~~~~~~~
In file included from /home/tihbohs/overlay_ws/src/godel/godel_robots/abb/godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:50:0:
/opt/ros/melodic/include/moveit/kinematics_base/kinematics_base.h:592:28: note: declared here
   MOVEIT_DEPRECATED double search_discretization_;
                            ^~~~~~~~~~~~~~~~~~~~~~
CMakeFiles/abb_irb1200_5_90_manipulator_moveit_ikfast_plugin.dir/build.make:62: recipe for target 'CMakeFiles/abb_irb1200_5_90_manipulator_moveit_ikfast_plugin.dir/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp.o' failed
make[2]: *** [CMakeFiles/abb_irb1200_5_90_manipulator_moveit_ikfast_plugin.dir/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp.o] Error 1
CMakeFiles/Makefile2:67: recipe for target 'CMakeFiles/abb_irb1200_5_90_manipulator_moveit_ikfast_plugin.dir/all' failed
make[1]: *** [CMakeFiles/abb_irb1200_5_90_manipulator_moveit_ikfast_plugin.dir/all] Error 2
Makefile:140: recipe for target 'all' failed
make: *** [all] Error 2
<== Failed to process package 'abb_irb1200_5_90_ikfast_manipulator_plugin':
  Command '['/home/tihbohs/overlay_ws/devel_isolated/abb_file_suite/env.sh', 'make', '-j8', '-l8']' returned non-zero exit status 2

Reproduce this error by running:
==> cd /home/tihbohs/overlay_ws/build_isolated/abb_irb1200_5_90_ikfast_manipulator_plugin && /home/tihbohs/overlay_ws/devel_isolated/abb_file_suite/env.sh make -j8 -l8

Command failed, exiting.

[AustinDeric]

I'll try to reprodice this error, see PR #248.

with that said, it does appear there is an error here:

godel_irb1200/abb_irb1200_5_90_ikfast_manipulator_plugin/src/abb_irb1200_5_90_manipulator_ikfast_moveit_plugin.cpp:366:102: error: no matching function for call to ‘const_pointer_casturdf::Link(urdf::LinkConstSharedPtr)’

---

it looks like i had a different error though:

CMake Error at /catkin_ws/src/godel_openvoronoi/src/version_string.cmake:20 (file):
  file failed to open for reading (No such file or directory):

    /catkin_ws/src/godel_openvoronoi/src/git-tag.txt
Call Stack (most recent call first):
  CMakeLists.txt:73 (INCLUDE)

[shobhitcito]

@AustinDeric thanks for looking into it

I am still not able to resolve the problem. I tried to go through the issues faced by other users and it hasn't helped me yet.

What should I do now? Thank you very much for helping out.

[sumr4693]

Hi, was anyone able to resolve the above issue when doing 'catkin_make_isolated'? I am facing the same issue. But I am using ROS Melodic..

Thanks in advance!

[shakthi-balan]

I am facing the exact same issue as above and I am using ROS melodic. Could anyone please solve this issue.

[kvnptl]

I am also facing the same error on ROS Melodic

[kvnptl]

At least after some debugging, godel packages are now building without any errors (still few warnings are there) on my system (ROS Melodic).

I'll try to list out few changes/resolutions here:

1. Use catkin build tools instead of catkin_make or anything else. (delete build and devel, if you already built the package with catkin_make)
2. Replace boost with std in IKFastPlugin : [melodic] IKFast compilation errors ros-industrial/fanuc#241
3. For error: error: static assertion failed: YOU_PERFORMED_AN_INVALID_TRANSFORMATION_CONVERSION #define EIGEN_STATIC_ASSERT(X,MSG) static_assert(X,#MSG); => Resolution: Error when building descartes from source with melodic-migration branch ros-industrial-consortium/descartes#234
4. Change logError, logInform,etc... with ROS_ERROR, ... check this
5. For error: error: conflicting declaration ‘typedef struct LZ4_stream_t LZ4_stream_t’ typedef struct { long long table[LZ4_STREAMSIZE_U64]; } LZ4_stream_t; => Resolution: Building error with catin build ethz-asl/lidar_align#16 (comment)
6. For error: error: ‘vector’ in namespace ‘std’ does not name a template type typedef std::vector<Eigen::Affine3d, Eigen::aligned_allocator<Eigen::Affine3d> > PoseVector; => Resolution: add #include <vector> in corresponding error file
7. For error: error: ‘accumulate’ is not a member of ‘std’ auto cost = std::accumulate(delta_buffer_.cbegin(), delta_buffer_.cend(), 0.0); => Resolution: ros-industrial-consortium/descartes@fdfb598
8. For error: undefined reference to tf::poseMsgToEigen(geometry_msgs::Pose_<std::allocator > const&, Eigen::Transform<double, 3, 1, 0>&)'=>Resolution: addeigen_conversionsinsidefind_package(catkin REQUIRED COMPONENTS )inCMakeLists.txt. `

NOTE: still haven't tried demo launch files

Please comment if further explanation required or clarification.

[gavanderhoorn]

Looking at forks of a repository is always very worthwhile.

The tecnalia-advancedmanufacturing-robotics/godel and sam-xl/godel forks seem to have resolved many (if not all) of the issues you found.