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Jacques plotnames.R
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Jacques plotnames.R
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# entity --------------------------------------------------------------------
entity <-
c(
"10",
"20",
"30",
"40",
"41",
"50",
"51",
"60",
"70",
"80",
"90",
"100",
"110",
"120",
"130",
"140",
"150",
"160",
"170",
"180",
"190",
"200",
"210",
"220",
"230",
"240",
"250",
"260",
"270",
"280",
"290",
"300",
"310",
"320",
"330",
"340",
"350",
"360",
"370",
"380",
"400",
"401",
"402",
"403",
"404",
"405",
"406",
"407",
"410",
"420",
"970",
"980",
"990",
"510",
"520",
"888" )
# jacques -----------------------------------------------------------------
jacques <- c(
"10",
"20",
"30",
"40",
"50",
"60",
"70",
"80",
"90",
"100",
"110",
"120",
"130",
"140",
"150",
"160",
"170",
"180",
"190",
"200",
"212",
"222",
"232",
"242",
"252",
"261",
"271",
"281",
"290",
"300",
"310",
"320",
"330",
"340",
"350",
"360",
"370",
"380",
"390",
"400",
"410",
"420",
"430",
"440",
"450",
"460",
"470",
"480",
"490",
"500",
"530", # This has been renamed from 970 to 530 (only in Jacques names, the english names shall remain the same )
"510",
"520",
"540",
"550",
"888" )
# english filenames -------------------------------------------------------
english_filenames <- c("Lip_men_1year_male_10",
"Oral_cavity_men_1year_male_20",
"Salivary_glands_men_1year_male_30",
"Oropharynx_men_1year_male_40",
"Nasopharynx_men_1year_male_41",
"Hypopharynx_men_1year_male_50",
"Pharynx_illdefined_men_1year_male_51",
"Oesophagus_men_1year_male_60",
"Stomach_men_1year_male_70",
"Small_intestine_men_1year_male_80",
"Colon_men_1year_male_90",
"Rectum_and_anus_men_1year_male_100",
"Liver_men_1year_male_110",
"Gallbladder_men_1year_male_120",
"Pancreas_men_1year_male_130",
"Nose_sinuses_men_1year_male_140",
"Larynx_men_1year_male_150",
"Lung_men_1year_male_160",
"Pleura_men_1year_male_170",
"Breast_men_1year_male_180",
"Cervix_uteri_men_1year_male_190",
"Corpus_uteri_men_1year_male_200",
"Uterus_other_men_1year_male_210",
"Ovary_etc_men_1year_male_220",
"Other_female_genital_organs_men_1year_male_230",
"Prostate_men_1year_male_240",
"Testis_men_1year_male_250",
"Penis_etc_men_1year_male_260",
"Kidney_men_1year_male_270",
"Bladder_etc_men_1year_male_280",
"Melanoma_of_skin_men_1year_male_290",
"Skin_nonmelanoma_men_1year_male_300",
"Eye_men_1year_male_310",
"Brain_central_nervous_system_men_1year_male_320",
"Thyroid_men_1year_male_330",
"Bone_men_1year_male_340",
"Soft_tissues_men_1year_male_350",
"NonHodgkin_lymphoma_men_1year_male_360",
"Hodgkin_lymphoma_men_1year_male_370",
"Multiple_myeloma_men_1year_male_380",
"Leukaemia_men_1year_male_400",
"Acute_lymphatic_leukaemia_men_1year_male_401",
"Chronic_lymphatic_leukaemia_men_1year_male_402",
"Other_and_unspecified_lymphatic_leukaemia_men_1year_male_403",
"Acute_myeloid_leukaemia_men_1year_male_404",
"Chronic_myeloid_leukaemia_men_1year_male_405",
"Other_and_unspecified_myeloid_leukaemia_men_1year_male_406",
"Leukaemia_cell_unspecified_men_1year_male_407",
"Other_specified_cancers_men_1year_male_410",
"Unknown_and_illdefined_men_1year_male_420",
"All_sites_but_nonmelanoma_skin_breast_and_prostate_cancer_men_1year_male_970",
"All_sites_men_1year_male_980",
"All_sites_but_nonmelanoma_skin_cancer_men_1year_male_990",
"Lip_oral_cavity_and_pharynx_men_1year_male_510",
"Colorectal_men_1year_male_520",
"Basocellular_carcinomas_men_1year_male_888",
"Lip_women_1year_female_10",
"Oral_cavity_women_1year_female_20",
"Salivary_glands_women_1year_female_30",
"Oropharynx_women_1year_female_40",
"Nasopharynx_women_1year_female_41",
"Hypopharynx_women_1year_female_50",
"Pharynx_illdefined_women_1year_female_51",
"Oesophagus_women_1year_female_60",
"Stomach_women_1year_female_70",
"Small_intestine_women_1year_female_80",
"Colon_women_1year_female_90",
"Rectum_and_anus_women_1year_female_100",
"Liver_women_1year_female_110",
"Gallbladder_women_1year_female_120",
"Pancreas_women_1year_female_130",
"Nose_sinuses_women_1year_female_140",
"Larynx_women_1year_female_150",
"Lung_women_1year_female_160",
"Pleura_women_1year_female_170",
"Breast_women_1year_female_180",
"Cervix_uteri_women_1year_female_190",
"Corpus_uteri_women_1year_female_200",
"Uterus_other_women_1year_female_210",
"Ovary_etc_women_1year_female_220",
"Other_female_genital_organs_women_1year_female_230",
"Prostate_women_1year_female_240",
"Testis_women_1year_female_250",
"Penis_etc_women_1year_female_260",
"Kidney_women_1year_female_270",
"Bladder_etc_women_1year_female_280",
"Melanoma_of_skin_women_1year_female_290",
"Skin_nonmelanoma_women_1year_female_300",
"Eye_women_1year_female_310",
"Brain_central_nervous_system_women_1year_female_320",
"Thyroid_women_1year_female_330",
"Bone_women_1year_female_340",
"Soft_tissues_women_1year_female_350",
"NonHodgkin_lymphoma_women_1year_female_360",
"Hodgkin_lymphoma_women_1year_female_370",
"Multiple_myeloma_women_1year_female_380",
"Leukaemia_women_1year_female_400",
"Acute_lymphatic_leukaemia_women_1year_female_401",
"Chronic_lymphatic_leukaemia_women_1year_female_402",
"Other_and_unspecified_lymphatic_leukaemia_women_1year_female_403",
"Acute_myeloid_leukaemia_women_1year_female_404",
"Chronic_myeloid_leukaemia_women_1year_female_405",
"Other_and_unspecified_myeloid_leukaemia_women_1year_female_406",
"Leukaemia_cell_unspecified_women_1year_female_407",
"Other_specified_cancers_women_1year_female_410",
"Unknown_and_illdefined_women_1year_female_420",
"All_sites_but_nonmelanoma_skin_breast_and_prostate_cancer_women_1year_female_970",
"All_sites_women_1year_female_980",
"All_sites_but_nonmelanoma_skin_cancer_women_1year_female_990",
"Lip_oral_cavity_and_pharynx_women_1year_female_510",
"Colorectal_women_1year_female_520",
"Basocellular_carcinomas_women_1year_female_888",
"Lip_men_5year_male_10",
"Oral_cavity_men_5year_male_20",
"Salivary_glands_men_5year_male_30",
"Oropharynx_men_5year_male_40",
"Nasopharynx_men_5year_male_41",
"Hypopharynx_men_5year_male_50",
"Pharynx_illdefined_men_5year_male_51",
"Oesophagus_men_5year_male_60",
"Stomach_men_5year_male_70",
"Small_intestine_men_5year_male_80",
"Colon_men_5year_male_90",
"Rectum_and_anus_men_5year_male_100",
"Liver_men_5year_male_110",
"Gallbladder_men_5year_male_120",
"Pancreas_men_5year_male_130",
"Nose_sinuses_men_5year_male_140",
"Larynx_men_5year_male_150",
"Lung_men_5year_male_160",
"Pleura_men_5year_male_170",
"Breast_men_5year_male_180",
"Cervix_uteri_men_5year_male_190",
"Corpus_uteri_men_5year_male_200",
"Uterus_other_men_5year_male_210",
"Ovary_etc_men_5year_male_220",
"Other_female_genital_organs_men_5year_male_230",
"Prostate_men_5year_male_240",
"Testis_men_5year_male_250",
"Penis_etc_men_5year_male_260",
"Kidney_men_5year_male_270",
"Bladder_etc_men_5year_male_280",
"Melanoma_of_skin_men_5year_male_290",
"Skin_nonmelanoma_men_5year_male_300",
"Eye_men_5year_male_310",
"Brain_central_nervous_system_men_5year_male_320",
"Thyroid_men_5year_male_330",
"Bone_men_5year_male_340",
"Soft_tissues_men_5year_male_350",
"NonHodgkin_lymphoma_men_5year_male_360",
"Hodgkin_lymphoma_men_5year_male_370",
"Multiple_myeloma_men_5year_male_380",
"Leukaemia_men_5year_male_400",
"Acute_lymphatic_leukaemia_men_5year_male_401",
"Chronic_lymphatic_leukaemia_men_5year_male_402",
"Other_and_unspecified_lymphatic_leukaemia_men_5year_male_403",
"Acute_myeloid_leukaemia_men_5year_male_404",
"Chronic_myeloid_leukaemia_men_5year_male_405",
"Other_and_unspecified_myeloid_leukaemia_men_5year_male_406",
"Leukaemia_cell_unspecified_men_5year_male_407",
"Other_specified_cancers_men_5year_male_410",
"Unknown_and_illdefined_men_5year_male_420",
"All_sites_but_nonmelanoma_skin_breast_and_prostate_cancer_men_5year_male_970",
"All_sites_men_5year_male_980",
"All_sites_but_nonmelanoma_skin_cancer_men_5year_male_990",
"Lip_oral_cavity_and_pharynx_men_5year_male_510",
"Colorectal_men_5year_male_520",
"Basocellular_carcinomas_men_5year_male_888",
"Lip_women_5year_female_10",
"Oral_cavity_women_5year_female_20",
"Salivary_glands_women_5year_female_30",
"Oropharynx_women_5year_female_40",
"Nasopharynx_women_5year_female_41",
"Hypopharynx_women_5year_female_50",
"Pharynx_illdefined_women_5year_female_51",
"Oesophagus_women_5year_female_60",
"Stomach_women_5year_female_70",
"Small_intestine_women_5year_female_80",
"Colon_women_5year_female_90",
"Rectum_and_anus_women_5year_female_100",
"Liver_women_5year_female_110",
"Gallbladder_women_5year_female_120",
"Pancreas_women_5year_female_130",
"Nose_sinuses_women_5year_female_140",
"Larynx_women_5year_female_150",
"Lung_women_5year_female_160",
"Pleura_women_5year_female_170",
"Breast_women_5year_female_180",
"Cervix_uteri_women_5year_female_190",
"Corpus_uteri_women_5year_female_200",
"Uterus_other_women_5year_female_210",
"Ovary_etc_women_5year_female_220",
"Other_female_genital_organs_women_5year_female_230",
"Prostate_women_5year_female_240",
"Testis_women_5year_female_250",
"Penis_etc_women_5year_female_260",
"Kidney_women_5year_female_270",
"Bladder_etc_women_5year_female_280",
"Melanoma_of_skin_women_5year_female_290",
"Skin_nonmelanoma_women_5year_female_300",
"Eye_women_5year_female_310",
"Brain_central_nervous_system_women_5year_female_320",
"Thyroid_women_5year_female_330",
"Bone_women_5year_female_340",
"Soft_tissues_women_5year_female_350",
"NonHodgkin_lymphoma_women_5year_female_360",
"Hodgkin_lymphoma_women_5year_female_370",
"Multiple_myeloma_women_5year_female_380",
"Leukaemia_women_5year_female_400",
"Acute_lymphatic_leukaemia_women_5year_female_401",
"Chronic_lymphatic_leukaemia_women_5year_female_402",
"Other_and_unspecified_lymphatic_leukaemia_women_5year_female_403",
"Acute_myeloid_leukaemia_women_5year_female_404",
"Chronic_myeloid_leukaemia_women_5year_female_405",
"Other_and_unspecified_myeloid_leukaemia_women_5year_female_406",
"Leukaemia_cell_unspecified_women_5year_female_407",
"Other_specified_cancers_women_5year_female_410",
"Unknown_and_illdefined_women_5year_female_420",
"All_sites_but_nonmelanoma_skin_breast_and_prostate_cancer_women_5year_female_970",
"All_sites_women_5year_female_980",
"All_sites_but_nonmelanoma_skin_cancer_women_5year_female_990",
"Lip_oral_cavity_and_pharynx_women_5year_female_510",
"Colorectal_women_5year_female_520",
"Basocellular_carcinomas_women_5year_female_888" )
# dataframe laves ---------------------------------------------------------
jacques_names <- data.frame( long = english_filenames,
"entitet" = entity,
"english" = 0,
"danish" = 1,
"finnish" = 2,
"icelandic" = 3,
"norwegian" = 4,
"swedish" = 5,
"dash" = "-",
"jac" = jacques,
"underscore" = "_",
"gender" = rep( 1:2, times = 2, each = 56 ),
"underscore2" = "_",
"follow_up" = rep( c(1,5), times = 1, each = 112),
"comma" = c( rep(",", times = 223), "" ),
"quote" = "\"" )
jacques_names$long_png <- paste0( jacques_names$long, ".png" )
jacques_names$english_name_jac <- paste0( jacques_names$english, jacques_names$dash, jacques_names$jac, jacques_names$underscore, jacques_names$gender, jacques_names$underscore2, jacques_names$follow_up, ".png" )
jacques_names$danish_name_jac <- paste0( jacques_names$danish, jacques_names$dash, jacques_names$jac, jacques_names$underscore, jacques_names$gender, jacques_names$underscore2, jacques_names$follow_up, ".png" )
jacques_names$finnish_name_jac <- paste0( jacques_names$finnish, jacques_names$dash, jacques_names$jac, jacques_names$underscore, jacques_names$gender, jacques_names$underscore2, jacques_names$follow_up, ".png" )
jacques_names$icelandic_name_jac <- paste0( jacques_names$icelandic, jacques_names$dash, jacques_names$jac, jacques_names$underscore, jacques_names$gender, jacques_names$underscore2, jacques_names$follow_up, ".png" )
jacques_names$norwegian_name_jac <- paste0( jacques_names$norwegian, jacques_names$dash, jacques_names$jac, jacques_names$underscore, jacques_names$gender, jacques_names$underscore2, jacques_names$follow_up, ".png" )
jacques_names$swedish_name_jac <- paste0( jacques_names$swedish, jacques_names$dash, jacques_names$jac, jacques_names$underscore, jacques_names$gender, jacques_names$underscore2, jacques_names$follow_up, ".png" )